DN621454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI12_ARATH (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3) HSP 1 Score: 186.037 bits (471), Expect = 1.798e-46 Identity = 100/162 (61.73%), Postives = 121/162 (74.69%), Query Frame = -3 Query: 270 RSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXS----GKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIVGSXXXXXXXXXXXXXFYKLAH 743 RSLQP+ KA+ L+KLREYKSDLN+LK+EFKRV G AD + VS +QR RLAMSVER++QS +RIRESRR+MLETEE+GISIV+DL+QQR+TLL++ NKLHGVDDAI KSKKVL++MSRRMTRNKWI+ S YKL+H Sbjct: 61 RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAIDKSKKVLTAMSRRMTRNKWIITSVIVALVLAIILIISYKLSH 222
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI13_ARATH (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.337e-33 Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = -3 Query: 327 RSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXS----GKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIVGS 743 R+L PNVK+ LL KLREYKSDLN K E KR+ G AD S +QR RL MS + + ++ +RI++SRR +LETEELG+SI++DL+ QR++LL + LHGVDD + KSKK+L++M+RRM RNKW +G+ Sbjct: 60 RNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNVGKSKKILTTMTRRMNRNKWTIGA 202
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI11_ARATH (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.746e-33 Identity = 70/143 (48.95%), Postives = 98/143 (68.53%), Query Frame = -3 Query: 327 RSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXS----GKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIVGS 743 R+L PN+K+ LL KLRE+KSDLN K E KR+ G AD S +QR RL MS ER+ ++ +R+++SRR M+ETEE+G+SI++DL+ QR++LL + LHGVDD I KSKK+L+ M+RRM +NKW +G+ Sbjct: 60 RTLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNIGKSKKILTDMTRRMNKNKWTIGA 202
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1B_HUMAN (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Homo sapiens GN=VTI1B PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13 Identity = 44/138 (31.88%), Postives = 74/138 (53.62%), Query Frame = -3 Query: 333 LLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXSGKADPN----VVSGE-------QRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIV 713 +++KLR Y+ DL KL RE + G+ D V E QR L E +N++ + I S R+ ET+++G I+E+L +QR+ L ++++L + +SKS+K+L SMSR++T NK ++ Sbjct: 77 MMSKLRNYRKDLAKLHREVRSTPLTATPG-----GRGDMKYGIYAVENEHMNRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLL 209
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1B_BOVIN (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Bos taurus GN=VTI1B PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12 Identity = 42/134 (31.34%), Postives = 72/134 (53.73%), Query Frame = -3 Query: 333 LLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXSGKADPNVVSGE-------QRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIV 713 +++KLR Y+ DL KL RE + K V E QR L + +N++ + I S R+ ET+++G I+E+L +QR+ L ++++L + +SKS+K+L SMSR++T NK ++ Sbjct: 77 MMSKLRTYRKDLAKLHREVRSTPLTATPGARGDM-KYGTYAVENEHMNRLQSQRALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLL 209
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1_YEAST (t-SNARE VTI1 OS=Saccharomyces cerevisiae GN=VTI1 PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = -3 Query: 336 KAMLLAKLREYKSDLNK-LKREFKRVXXXXXXXXXXXSGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWI 722 +A AKLRE+K + +KR + + G + + + +QR++L + + +SG+R++++ R+ ETE +G I+ DL QRETL N+R L D + KS K L +M+RR+ NK+I Sbjct: 69 RATYKAKLREWKKTIQSDIKRPLQSLVDSGDRDRLF--GDLNASNIDDDQRQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADSYVDKSIKTLKTMTRRLVANKFI 196
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1B_MOUSE (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Mus musculus GN=Vti1b PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = -3 Query: 267 LLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXSGKADPNVVSGE-------QRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIVGSXXXXXXXXXXXXXFYKLAHH 713 +++KLR Y+ DL KL RE + K + E QR L E +N++ + I S R+ ET+++G I+E+L +QR+ L ++++L ++ +SKS+K+L SMSR++ NK ++ +YK H Sbjct: 77 MMSKLRNYRKDLAKLHREVRSTPLTAAPGGRGDL-KYGTYTLENEHLNRLQSQRALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQRDQLERTKSRLVNTNENLSKSRKILRSMSRKVITNKLLLSVIILLELAILVGLVYYKFFRH 231
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1B_RAT (Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus GN=Vti1b PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = -3 Query: 267 LLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXSGKADPNVVSGE-------QRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNKWIVGSXXXXXXXXXXXXXFYKLAHH 713 +++KLR Y+ DL KL RE + K + E QR L E +N++ + I S R+ ET+++G I+E+L +QR+ L ++++L ++ +SKS+K+L SMSR++ NK ++ +YK H Sbjct: 77 MMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDL-KFGTYTLENEHLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTNENLSKSRKILRSMSRKVITNKLLLSVIIVLELAILVGLVYYKFFRH 231
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1A_MOUSE (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus GN=Vti1a PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 38/134 (28.36%), Postives = 70/134 (52.24%), Query Frame = -3 Query: 342 RSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXSGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNK 743 R + P + M ++R YK ++ KL+ +FKR D S QR L + ER+ +S R+ ++ +ETE++G ++E+L+ RE + +R++L D + KS ++L+ M RR+ +N+ Sbjct: 60 REIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNEL-LGDAGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANLGKSSRILTGMLRRIIQNR 192
BLAST of DN621454 vs. ExPASy Swiss-Prot
Match: VTI1A_RAT (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Rattus norvegicus GN=Vti1a PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 38/140 (27.14%), Postives = 73/140 (52.14%), Query Frame = -3 Query: 342 RSLQPNVKAMLLAKLREYKSDLNKLKREFKR----VXXXXXXXXXXXSGKADPN--VVSGEQRERLAMSVERINQSGERIRESRRVMLETEELGISIVEDLNQQRETLLNSRNKLHGVDDAISKSKKVLSSMSRRMTRNK 743 R + P + M ++R YK ++ KL+ +FKR +G + N + E+R L + ER+ +S R+ ++ +ETE++G ++E+L+ RE + +R +L D + KS ++L+ M RR+ +N+ Sbjct: 60 REIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQLIKLREERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRARERLRETDANLGKSSRILTGMLRRIIQNR 199 The following BLAST results are available for this feature:
BLAST of DN621454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621454 ID=DN621454; Name=DN621454; organism=Citrus sinensis; type=EST; length=745bpback to top |