DN621096

Overview
NameDN621096
Unique NameDN621096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L   + EYAEFLH   K+FTDF
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVNATTEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.692e-15
Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            M++LI++VNK+Q A T+LG H +          LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQ   L     EY EFLHI  K+F+ F
Sbjct:    1 MDSLITIVNKLQDAFTSLGVHMQLD--------LPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQ---LINGVTEYGEFLHIKGKKFSSF 89          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN3_RAT (Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 51/101 (50.50%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  201 KMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            +ME LI LVN++Q A +ALG         +    LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L     EYAEFLH   K+FTDF
Sbjct:    5 EMEELIPLVNRLQDAFSALGQ--------SCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVTSKAEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN3_MOUSE (Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 51/101 (50.50%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  201 KMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            +ME LI LVN++Q A +ALG         +    LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L     EYAEFLH   K+FTDF
Sbjct:    5 EMEELIPLVNRLQDAFSALGQ--------SCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVTSKAEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN3_HUMAN (Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 51/101 (50.50%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  201 KMENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            +ME LI LVN++Q A +ALG         +    LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L     EYAEFLH   K+FTDF
Sbjct:    5 EMEELIPLVNRLQDAFSALGQ--------SCLLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVTSKAEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 49/100 (49.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQ   L     EYAEFLH   K+FTDF
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQ---LIFSKTEYAEFLHCKSKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 49/100 (49.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQ   L     EYAEFLH   K+FTDF
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQ---LIFSKTEYAEFLHCKSKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.870e-14
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQ   L     EYAEFLH   ++FTDF
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQ---LIFSKTEYAEFLHCKSRKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.190e-14
Identity = 48/100 (48.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME LI LVNK+Q A +++G              LP IA            LE+ VG+DFLPRGSGIVTRRPL+LQ   L     E+AEFLH   K+FTDF
Sbjct:    6 MEELIPLVNKLQDAFSSIGQSCHLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQ---LIFSKTEHAEFLHCKSKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            M+ LI ++N++Q A + LG         ++   LP IA            LE+ VGKDFLPRGSGIVTRRPL+LQ   L +   EYAEFLH    RF DF
Sbjct:    8 MQALIPVINRVQDAFSQLGT--------SVSFELPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQ---LIQDRNEYAEFLHKKGHRFVDF 96          
The following BLAST results are available for this feature:
BLAST of DN621096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DYN1_BOVIN2.610e-1650.00Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1[more]
DYN_DROME1.692e-1549.00Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=... [more]
DYN3_RAT2.209e-1550.50Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2[more]
DYN3_MOUSE2.209e-1550.50Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1[more]
DYN3_HUMAN2.209e-1550.50Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4[more]
DYN2_RAT8.395e-1549.00Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1[more]
DYN2_MOUSE8.395e-1549.00Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2[more]
DYN2_BOVIN1.870e-1448.00Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1[more]
DYN2_HUMAN3.190e-1448.00Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2[more]
DYN1_CAEEL3.527e-1346.00Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621096 ID=DN621096; Name=DN621096; organism=Citrus sinensis; type=EST; length=506bp
CTTTTAAATTTCAAACTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTGTCC
TACCGGCGAAGCAAAAACTAATCACACAGATCTCCTCTGAACGTCGCCGT
TTCCAGCATCAGTTGTCAGATCCAGCTGATCTGAATCTGACAGCTGAGAT
CATCTACGTTGCCGCCGCCGTCTCCCGAGATATCTACTTAGCTGCGAGAG
AAAATGGAGAACTTGATTTCTTTGGTTAACAAAATACAAAGAGCTTGTAC
GGCTCTTGGCGACCACGGTGAAGCCAGCGCATTGCCTACTCTTTGGGACT
CTCTTCCTGCTATCGCCGTCGTCGGTGGCCAGAGTTCTGGAAAGTCATCA
GTGTTGGAGAGTATTGTTGGCAAGGACTTTTTACCGCGTGGATCTGGTAT
CGTTACACGGCGTCCTCTGGTGTTGCAGCTTCATAAACTCGAAGAANGCA
GCAGAGAATATGCAGAGTTTCTTCACATTCCAAGGAAAAGATTTACCGAT
TTTGCT
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