DN621096

Overview
NameDN621096
Unique NameDN621096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.222e-41
Identity = 83/100 (83.00%), Postives = 86/100 (86.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            MENLISLVNKIQRACTALGDHGE SALPTLWDSLPAIA            LES+VGKDFLPRGSGIVTRRPLVLQLHK+EE SREYAEFLH+PRKRFTDF
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIEEGSREYAEFLHLPRKRFTDF 100          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.163e-40
Identity = 82/100 (82.00%), Postives = 86/100 (86.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            MENLISLVNKIQRACTALGDHGE SALPTLWDSLPAIA            LES+VGKDFLPRGSGIVTRRPLVLQLHK++E SREYAEFLH+PRKRFTDF
Sbjct:    1 MENLISLVNKIQRACTALGDHGENSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIDEGSREYAEFLHLPRKRFTDF 100          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 2.865e-39
Identity = 79/101 (78.22%), Postives = 87/101 (86.14%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDFA 506
            MENLISLVNKIQRACTALGDHG++SALPTLWDSLPAIA            LESIVGKDFLPRGSGIVTRRPLVLQL K+++ +REYAEFLH+PRK+FTDFA
Sbjct:    1 MENLISLVNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLQKIDDGTREYAEFLHLPRKKFTDFA 101          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.270e-36
Identity = 73/101 (72.28%), Postives = 86/101 (85.15%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDFA 506
            ME+LI+LVNKIQRACTALGDHGE S+LPTLWDSLPAIA            LES+VGKDFLPRG+GIVTRRPLVLQLH+++E  +EYAEF+H+P+K+FTDFA
Sbjct:    1 MESLIALVNKIQRACTALGDHGEGSSLPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGAGIVTRRPLVLQLHRIDE-GKEYAEFMHLPKKKFTDFA 100          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.147e-30
Identity = 64/104 (61.54%), Postives = 80/104 (76.92%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGE---ASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDFA 506
            ME+LI LVN+IQRACT LGD+G    ++A  +LW++LP +A            LESIVG+DFLPRGSGIVTRRPLVLQLHK ++ + EYAEFLH+P+K+FTDFA
Sbjct:    4 MESLIGLVNRIQRACTVLGDYGGGTGSNAFNSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTDDGTEEYAEFLHLPKKQFTDFA 107          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.207e-29
Identity = 63/101 (62.38%), Postives = 75/101 (74.26%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDFA 506
            M++LI L+NKIQRACT LGDHG      +LW++LP +A            LES+VG+DFLPRGSGIVTRRPLVLQLHK E+ + EYAEFLH P+KRF DFA
Sbjct:    4 MKSLIGLINKIQRACTVLGDHGGEGM--SLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGTTEYAEFLHAPKKRFADFA 102          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.621e-28
Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHG-EASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDFA 506
            ME+LI L+N IQRACT +GDHG +++AL +LW++LP++A            LESIVG+DFLPRGSGIVTRRPLVLQLHK E  + + AEFLH+  K+FT+F+
Sbjct:    1 MESLIVLINTIQRACTVVGDHGGDSNALSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKTENGTEDNAEFLHLTNKKFTNFS 102          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN1_RAT (Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L   + EYAEFLH   K+FTDF
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVNSTTEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN1_MOUSE (Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L   + EYAEFLH   K+FTDF
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVNSTTEYAEFLHCKGKKFTDF 94          
BLAST of DN621096 vs. ExPASy Swiss-Prot
Match: DYN1_HUMAN (Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  204 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEXSREYAEFLHIPRKRFTDF 503
            ME+LI LVN++Q A +A+G + +          LP IA            LE+ VG+DFLPRGSGIVTRRPLVLQ   L   + EYAEFLH   K+FTDF
Sbjct:    6 MEDLIPLVNRLQDAFSAIGQNADLD--------LPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQ---LVNATTEYAEFLHCKGKKFTDF 94          
The following BLAST results are available for this feature:
BLAST of DN621096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SDL5A_SOYBN5.222e-4183.00Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN1.163e-4082.00Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH2.865e-3978.22Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1B_ARATH2.270e-3672.28Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1E_ARATH4.147e-3061.54Dynamin-related protein 1E OS=Arabidopsis thaliana... [more]
DRP1C_ARATH1.207e-2962.38Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
DRP1D_ARATH6.621e-2858.82Dynamin-related protein 1D OS=Arabidopsis thaliana... [more]
DYN1_RAT2.610e-1650.00Dynamin-1 OS=Rattus norvegicus GN=Dnm1 PE=1 SV=2[more]
DYN1_MOUSE2.610e-1650.00Dynamin-1 OS=Mus musculus GN=Dnm1 PE=1 SV=2[more]
DYN1_HUMAN2.610e-1650.00Dynamin-1 OS=Homo sapiens GN=DNM1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06D21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006D21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621096 ID=DN621096; Name=DN621096; organism=Citrus sinensis; type=EST; length=506bp
CTTTTAAATTTCAAACTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTGTCC
TACCGGCGAAGCAAAAACTAATCACACAGATCTCCTCTGAACGTCGCCGT
TTCCAGCATCAGTTGTCAGATCCAGCTGATCTGAATCTGACAGCTGAGAT
CATCTACGTTGCCGCCGCCGTCTCCCGAGATATCTACTTAGCTGCGAGAG
AAAATGGAGAACTTGATTTCTTTGGTTAACAAAATACAAAGAGCTTGTAC
GGCTCTTGGCGACCACGGTGAAGCCAGCGCATTGCCTACTCTTTGGGACT
CTCTTCCTGCTATCGCCGTCGTCGGTGGCCAGAGTTCTGGAAAGTCATCA
GTGTTGGAGAGTATTGTTGGCAAGGACTTTTTACCGCGTGGATCTGGTAT
CGTTACACGGCGTCCTCTGGTGTTGCAGCTTCATAAACTCGAAGAANGCA
GCAGAGAATATGCAGAGTTTCTTCACATTCCAAGGAAAAGATTTACCGAT
TTTGCT
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