CX047077

Overview
NameCX047077
Unique NameCX047077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.206e-14
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE   V  + EV PG+   GM V EI   PRMGP FGAM++SG+K A   +K+L
Sbjct:  159 VDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = -2
Query:  495 NWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 845
            NW  V       +C+DP  +EA +V+ + GHD          G   A G++     + GM +           + PG  ++ +  +EDA+V  T     G+IVTGM  A   G PRMGPTFGAM++SG++AA  AL  LG
Sbjct:  153 NWTPVHALPREITCVDPIAVEADLVIDATGHDAVAVSKLQERGVLNAPGIEHADEHNTGMDQTGDDSYGAPGHDSPGHDSMWVGQSEDAVVEHTGLAHEGLIVTGMATATTYGLPRMGPTFGAMLLSGKRAAQAALDELG 292          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  498 NWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE------------------------EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 845
            NW  V       +C+DP  +EA +V+ + GHD    A  VK+L   G++                         + PG  ++ +  +EDA+V  T     G++VTGM  A   G PRMGPTFGAM++SG++AA +AL  L
Sbjct:  156 NWTPVHALPREITCVDPIAVEADLVIDATGHD----AMAVKKLDERGVLNAPGLEDEASGMDQTDDDTYGAPGHDSPGHDSMWVGESEDAVVEHTGLAHDGLVVTGMATATTYGLPRMGPTFGAMLVSGKRAAQVALDEL 291          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METTP (Putative thiazole biosynthetic enzyme OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1121 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = -2
Query:  492 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSI-----GMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 803
            +DP  + A+VV+   GHD        K++        G+I E P   AL     E  +V  TREV PG+IV GM    +   PRMGP FG M++SG+KAA +AL+ L Q
Sbjct:  155 VDPLAIRARVVIDGTGHDAAVCRVVQKKIPGAIVGESGVIGEKPMWAAL----GEKIVVDATREVYPGLIVAGMAATTVAAGPRMGPIFGGMLLSGEKAASIALEKLAQ 259          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METVS (Putative thiazole biosynthetic enzyme OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0663 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.576e-13
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = -2
Query:  492 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 803
            +DP  + AK V+ S GHD    +T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A L L+ L +
Sbjct:  160 VDPITISAKYVIDSTGHDASVVSTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLFVCGMTANAYHAGYRMGAIFGGMYLSGKKCAELILEKLNK 261          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULSO (Putative thiazole biosynthetic enzyme OS=Sulfolobus solfataricus GN=SSO0436 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.967e-13
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+  TGM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYATGMAVTEVKGLPRMGPIFGAMVLSGKAVAGEITKDL 260          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.040e-12
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = -2
Query:  498 WALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 842
            W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  143 WTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.040e-12
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++  +  E+++ R TREV PG+ V GM         RMG  FG M +SG+K A L L+ L
Sbjct:  160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of CX047077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
THI4_METS57.206e-1439.22Putative thiazole biosynthetic enzyme OS=Metallosp... [more]
THI4_NATPD9.411e-1435.71Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_HALMA9.411e-1434.29Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_METTP2.096e-1340.37Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METVS3.576e-1338.46Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULSO7.967e-1338.24Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_PYRIL1.040e-1235.65Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METMP1.040e-1240.20Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULIY1.775e-1237.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM1.775e-1237.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A04-A7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047077 ID=CX047077; Name=CX047077; organism=Citrus sinensis; type=EST; length=900bp
TTTTTAGCAACAAAAACAGAGTAAGCTCAGATCTTCATCATTGATCTTAA
TCACATCAGCACTGTCCCATTGGCTGATGCCTCAAGTTATAAACATACAA
AGCAAAGAAAAGGGAACAGCCCAAGGGCAGTCTTACACATAATACAGATA
ACAAGGACTAGATACGCAACTGCAAATTCACCCCCGAAAAACTCACAACG
GTTTCTTACAAGAGGAGAAAGAAATTAAAATTAAAGGTTGCATGATGGAC
CGGAAACAAACACTTTATTCACAAAACCTCACAACATCATCTCATTATTC
GCATCAACCATCCATCACAACCACCTAAATACAACTACTTTTTTGCCAGA
GTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTTATTATCAA
ATTAACCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGCTCA
GGGTGAACACCTCCCACATATGTACCGTCTAATGCATTCGGCTGGCCCAG
TGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTC
CAAATGTTGGCCCCATTCTAGGAGCACCATCAATCTCGGCAACTTCCATG
CCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGC
ATCTTCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGCACTTCCTCAA
TCATTCCGATACTCTTCAACCTCTTTACTCCAGTGGCCCCAAAAGGCCCA
TCATGGCCACAAGAGCTCACAACCACCTTCGCTTCCATTACATTGGGATC
CATGCAAGACTGTGTATCGTGATTCATTGACACCAACGCCCAGTTGGTCA
CCACACCACCAACTCTGCCGCCTTTGACTATCANGTCCTCGGCTGCCACT
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