CX047077

Overview
NameCX047077
Unique NameCX047077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METM7 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0597 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.027e-12
Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ L
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKL 259          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 35/104 (33.65%), Postives = 58/104 (55.77%), Query Frame = -2
Query:  492 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 803
            +DP   +AK V+ + GHD    +   +++  +G+  ++ G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L +
Sbjct:  153 VDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METM6 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1321 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_METM5 (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0226 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.164e-12
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++     E+++ R TRE+ PG+ V GM         RMG  FG M +SG+K A + L+ +
Sbjct:  160 IDPLTISAKYVIDSTGHDASAVHTLARKNKDLGI--EVPGEKSMWAEKGENSLTRNTREIFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAEMILEKM 259          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.744e-12
Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP   +AK V+ + GHD    +   +++  +G+  +V G K+     +E  +V  T  V PG+ V G+ V  + G PRMGP FG M++SG+K A +  K L
Sbjct:  153 VDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.150e-11
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = -2
Query:  498 WALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 842
            W  + M+    S +DP   +A+ V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+   GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  143 WTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
BLAST of CX047077 vs. ExPASy Swiss-Prot
Match: THI4_SULIN (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1140 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 37/102 (36.27%), Postives = 56/102 (54.90%), Query Frame = -2
Query:  498 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 803
            +DP  + AK VV + GHD    +   +++  +G++  + G K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  161 VDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IAGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
The following BLAST results are available for this feature:
BLAST of CX047077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
THI4_SULIL1.775e-1237.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.775e-1237.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.775e-1237.25Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METM73.027e-1238.24Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_PYRCJ5.164e-1233.65Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_METM65.164e-1237.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_METM55.164e-1237.25Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_PYRAE6.744e-1235.29Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]
THI4_THENV1.150e-1133.91Putative thiazole biosynthetic enzyme OS=Thermopro... [more]
THI4_SULIN1.502e-1136.27Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_12A04_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-12A04-A7-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX047077 ID=CX047077; Name=CX047077; organism=Citrus sinensis; type=EST; length=900bp
TTTTTAGCAACAAAAACAGAGTAAGCTCAGATCTTCATCATTGATCTTAA
TCACATCAGCACTGTCCCATTGGCTGATGCCTCAAGTTATAAACATACAA
AGCAAAGAAAAGGGAACAGCCCAAGGGCAGTCTTACACATAATACAGATA
ACAAGGACTAGATACGCAACTGCAAATTCACCCCCGAAAAACTCACAACG
GTTTCTTACAAGAGGAGAAAGAAATTAAAATTAAAGGTTGCATGATGGAC
CGGAAACAAACACTTTATTCACAAAACCTCACAACATCATCTCATTATTC
GCATCAACCATCCATCACAACCACCTAAATACAACTACTTTTTTGCCAGA
GTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTTATTATCAA
ATTAACCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGCTCA
GGGTGAACACCTCCCACATATGTACCGTCTAATGCATTCGGCTGGCCCAG
TGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTC
CAAATGTTGGCCCCATTCTAGGAGCACCATCAATCTCGGCAACTTCCATG
CCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGC
ATCTTCTGCAGAGTTCATGTCCAGTGCCTTCATTCCAGGCACTTCCTCAA
TCATTCCGATACTCTTCAACCTCTTTACTCCAGTGGCCCCAAAAGGCCCA
TCATGGCCACAAGAGCTCACAACCACCTTCGCTTCCATTACATTGGGATC
CATGCAAGACTGTGTATCGTGATTCATTGACACCAACGCCCAGTTGGTCA
CCACACCACCAACTCTGCCGCCTTTGACTATCANGTCCTCGGCTGCCACT
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