DN617890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.687e-12 Identity = 41/106 (38.68%), Postives = 59/106 (55.66%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 486 LPF +GSG AA+A+ E +++ +T + L+V+A+ GI DLGSG NVD CVITK + LR P + + + P T VL + PL +E+VE Sbjct: 161 LPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPL--TLELVE 264
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_ENCCU (Probable proteasome subunit beta type-7 OS=Encephalitozoon cuniculi GN=PUP1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.510e-12 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 283 FATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNH 480 F ++GSGSL A+A ES+Y+ + KDE I L DA+ GI NDL SGSN+DVCVI E+LRN+ Sbjct: 130 FVSLGSGSLGAIATLESRYR-AMDKDEAIDLACDAVKAGILNDLYSGSNIDVCVIDYSGVEFLRNY 194
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.584e-12 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 193 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKG-YSF-PKKTEVLLTKITPL 486 LPF +GSG AA+A+ E +++ +T + +L+V+AI GI +DLGSG NVD CVIT G + R L P V G Y F P T VL ++ PL Sbjct: 161 LPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQR--ALSTPTEPVQRAGRYRFAPGTTPVLTREVRPL 258
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11 Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSF-PKKTEVLLTKITPLRERVEVVE 486 LPF +GSG AA+A+ E +++ +T + +L+V+AI GI DLGSG NVD CVIT + LR P + + Y F P T VL + PL +E+VE Sbjct: 161 LPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGGNVDACVITAAGAKMLRALSSPT-KPIERSSQYRFAPGTTPVLSQTVVPL--TLELVE 264 The following BLAST results are available for this feature:
BLAST of DN617890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617890 ID=DN617890; Name=DN617890; organism=Citrus sinensis; type=EST; length=488bpback to top |