DN617890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 1.782e-48 Identity = 93/114 (81.58%), Postives = 107/114 (93.86%), Query Frame = -3 Query: 148 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE-GGDAMEE 486 LPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV +AIC GIFNDLGSGSNVD+CVITKGHKEYLRN++ PNPRT+V++KGYSF KKTEVLLTKITPL ERVE+VE G+AMEE Sbjct: 161 LPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKITPLLERVEIVEVAGEAMEE 274
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 6.771e-48 Identity = 90/113 (79.65%), Postives = 106/113 (93.81%), Query Frame = -3 Query: 148 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVEGGDAMEE 486 LPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV ++IC GIFNDLGSGSNVD+CVITKG+KEYLRN++ PNPRT+V++KGYSF KKTEVLLTKITPL ERVE+ E G+AMEE Sbjct: 161 LPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKITPLLERVEITEVGEAMEE 273
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.422e-21 Identity = 57/104 (54.81%), Postives = 66/104 (63.46%), Query Frame = -3 Query: 175 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEV 486 LP+ TMGSGSLAAMA+FE+KYK +TK+E I LV +AI GIFNDLGSGSNVDV VI LRN+ PN R F N T VL I PL +V + Sbjct: 156 LPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDVTVIEPSGVTVLRNYQTPNERKFRNNPYIFKQGTTPVLKQDIAPLSTKVVI 259
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.573e-20 Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 486 LP+ TMGSGSLAAMA+FE K++ + ++E LV +AI GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL KITPL +EV+E Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPL--EIEVLE 268
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19 Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 486 LP+ TMGSGSLAAMA+FE K++ + ++E +LV +AI GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL K+TPL +EV+E Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTPL--ELEVLE 268
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.331e-19 Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 486 LP+ TMGSGSLAAMA+FE K++ + ++E +LV +AI GIFNDLGSGSN+D+CVI+K ++LR +PN + + T VL K+TPL +EV+E Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNKKGTRLGRYRCEKGTTAVLTEKVTPL--EIEVLE 268
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.738e-19 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = -3 Query: 211 FATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKG-HKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 480 + ++GSGSLAAMA+ ES +K+ LTK+E I+L DAI GI+NDLGSGSNVDVCV+ G EYLRN+L PN R K Y FP+ T +L Sbjct: 153 YLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE-EKQKSYKFPRGTTAVL 242
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 3.871e-19 Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 486 LP+ TMGSGSLAAMA+FE K++ + ++E QLV +AI GIFNDLGSGSN+D+CVI+K ++LR + +PN + + T VL K+T L +EV+E Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTAL--DIEVLE 268
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19 Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = -3 Query: 169 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLT-KITPLRERVEVVE 486 LP+ TMGSGSLAAMA+FE K++ + ++E +LV +AI GIFNDLGSGSN+D+CVI+K ++LR + +PN + Y K T +LT K+T L +EV+E Sbjct: 165 LPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKG-TRFGRYRCEKGTNAVLTEKVTTL--EIEVLE 268
BLAST of DN617890 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.174e-13 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = -3 Query: 211 LPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICFGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 486 LP+ +GSGSLAA+++ E+KY+ L + E ++LV +AI GIFNDLGSGSN D+ VI + R + PN R +K Y++ + T +L Sbjct: 157 LPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGYSKPNERATKQSK-YTYDRGTTAVL 247 The following BLAST results are available for this feature:
BLAST of DN617890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617890 ID=DN617890; Name=DN617890; organism=Citrus sinensis; type=EST; length=488bpback to top |