DN617796

Overview
NameDN617796
Unique NameDN617796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.980e-29
Identity = 58/89 (65.17%), Postives = 72/89 (80.90%), Query Frame = -2
Query:  205 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 471
            + A+L+ +FF K K +PSHW KIS GGL+RI E+YTW IYS+RL+TL G YGFWK+VS L+R E+RRYLEMFY LK+R L +SVPLA E
Sbjct:  717 RAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.377e-29
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -2
Query:  205 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 471
            + A+L+ +FF K K +PSHW KIS GGL+RI E+YTW+IYS+RL+TL G YGFWK+VS L+R E+RRYLEMFY LK+R L +SVPLA E
Sbjct:  717 RAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.523e-29
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = -2
Query:  205 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 465
            A+L+ DFF K K +PSHW KIS GGL+RI+E+YTWKIYSERL+TL G   FWK+VS L+R E+RRY+EMFY LK+R L +SVPLA E
Sbjct:  717 AQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 9.517e-24
Identity = 49/77 (63.64%), Postives = 64/77 (83.12%), Query Frame = -2
Query:  241 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKF 471
            K A+++ +FF KC  +PS+W +IS GG +RIYE+YTWK+YSERLMTL GAYGFW YVSKLER +T RY++MFY L++
Sbjct:  143 KDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
The following BLAST results are available for this feature:
BLAST of DN617796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUSY_MEDSA1.980e-2965.17Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUSY_VICFA3.377e-2965.17Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_ALNGL7.523e-2966.67Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_SACOF9.517e-2463.64Sucrose synthase (Fragment) OS=Saccharum officinar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617796 ID=DN617796; Name=DN617796; organism=Citrus sinensis; type=EST; length=559bp
AACAGACAGCCACGATCTGTGAACACTGGTCGAGAATAGCACAGGAAGAT
TTAAGTGTCGAGAGGCTCGAATATCCTTTTAACCATACAACATAAAGCAT
TACATATACATACAAAAAGTACTCTTTATTTTTGCACTATAGTTACGGGA
GGTAGCTGGGTAATTATTAGCAGTTCCTTGAATACCAGCAGCTTAATGTT
GGTTCTCACTTGCCAAAGGAACAGACTTCACCAAATCACGGAACTTTAGA
ATGTAGAACATCTCAAGGTACCTCCGGGTCTCACGCCTCTCAAGTTTTGA
AACATACTTCCAGAAACCATATGCCCCAGCCAATGTCATTAGCCTTTCAG
AATAAATCTTCCAGGTGTACCTTTCATAAATCCTTTTAAGCCCTCCATCA
GAGATTTTTTTCCAATGGCTTGGATTTTCCTTGCACTTTCCAAAGAAATC
TGCCATGAGTTCAGCTTTTTTTTAAAAGAAATTTATAATTCTATAAATCG
AATGAATTGAATATTATGATACATGCGTGGAGCTAACAACACAGCTTGGC
TTTAACTTG
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