DN617796

Overview
NameDN617796
Unique NameDN617796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.198e-38
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = -2
Query:  211 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 465
            +EL+ DFF +CKE+P+HW K+SDGGL+RIYERYTWKIYSERLMTLAG Y FWKYVSKLERRETRRYLEMFYILKFRDL  SVP+A
Sbjct:  723 SELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.725e-36
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = -2
Query:  202 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASEN 471
            K +E +  FF KCKE+P+HW+KIS GGL+RIYE+YTWK+YSERLMTLAG YGFWKYVS L+RRETRRYLEMFY LK+R+L KSVPLA +N
Sbjct:  716 KASEQLVSFFEKCKEDPAHWEKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAIDN 805          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.175e-35
Identity = 68/90 (75.56%), Postives = 78/90 (86.67%), Query Frame = -2
Query:  199 KAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 468
            +AE M +FF KC+E+P++W KIS GGL RI ERYTW+ YSERLMTLAG YGFWKYVSKLERRETRRYLEMFYILKFRDL  SVPLA++ +
Sbjct:  664 QAEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEE 753          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.554e-34
Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = -2
Query:  199 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 471
            K AEL+ DFF K K++ +HW  IS+GGLKRIYE+YTWKIYSERL+TLAG YGFWKYVS L+RRET+RYLEMFY LK+R+L KSVPLA + +
Sbjct:  718 KAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGE 808          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 64/87 (73.56%), Postives = 72/87 (82.76%), Query Frame = -2
Query:  205 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASE 465
            A  +  FF  C  NP+HW KIS+GGLKRIYERYTWK YSERL+TLAG Y FWK+VSKLERRETRRYLEMFY LKFRDL  S+PLA++
Sbjct:  717 AATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.035e-33
Identity = 62/91 (68.13%), Postives = 75/91 (82.42%), Query Frame = -2
Query:  199 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 471
            K + L+  FFGKC+E+PSHW KIS GGL+RI E+YTWK+YSERLMTL+G YGFWKYVS L+RRETRRYLEM Y LK+R +  +VPLA E +
Sbjct:  722 KASALLVGFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGE 812          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.122e-32
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = -2
Query:  199 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 471
            K + L+ +FF KC+E+PSHW KIS GGL+RI E+YTWK+YSERLMTL G YGFWKYVS LERRETRRYLEM Y LK+R +  +VPLA E +
Sbjct:  722 KASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32
Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = -2
Query:  199 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 471
            K + L+ DFF KC+  PSHW KIS GGL+RI E+YTWK+YSERLMTL G YGFWKYVS LERRETRRYLEM Y LK+R +  +VPLA E +
Sbjct:  722 KASALLVDFFDKCQAEPSHWSKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGE 812          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.465e-32
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = -2
Query:  211 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLA 471
            K A+++ +FF KCK +PS+W +IS GGL+RIYE+YTWK+YSERLMTL G YGFWKYVS LERRETRRY+EMFY LK+R L   VPL+
Sbjct:  714 KAADILVNFFDKCKADPSYWDEISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLS 800          
BLAST of DN617796 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.499e-32
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = -2
Query:  199 KKAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGAYGFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASENQ 471
            K A+++ +FF K   +PS+W KIS GGLKRIYE+YTWK+YSERLMTL G YGFWKYVS LERRETRRYLEMFY LK+R L  +VPLA + +
Sbjct:  713 KAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGE 803          
The following BLAST results are available for this feature:
BLAST of DN617796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUS2_PEA5.198e-3882.35Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS1_TULGE3.725e-3674.44Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUSY_BETVU9.175e-3575.56Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS2_TULGE4.554e-3471.43Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_ARATH2.952e-3373.56Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_HORVU5.035e-3368.13Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]
SUS1_ORYSJ1.122e-3268.13Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUS2_MAIZE1.465e-3268.13Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUS1_MAIZE1.465e-3268.97Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUS1_HORVU2.499e-3268.13Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617796 ID=DN617796; Name=DN617796; organism=Citrus sinensis; type=EST; length=559bp
AACAGACAGCCACGATCTGTGAACACTGGTCGAGAATAGCACAGGAAGAT
TTAAGTGTCGAGAGGCTCGAATATCCTTTTAACCATACAACATAAAGCAT
TACATATACATACAAAAAGTACTCTTTATTTTTGCACTATAGTTACGGGA
GGTAGCTGGGTAATTATTAGCAGTTCCTTGAATACCAGCAGCTTAATGTT
GGTTCTCACTTGCCAAAGGAACAGACTTCACCAAATCACGGAACTTTAGA
ATGTAGAACATCTCAAGGTACCTCCGGGTCTCACGCCTCTCAAGTTTTGA
AACATACTTCCAGAAACCATATGCCCCAGCCAATGTCATTAGCCTTTCAG
AATAAATCTTCCAGGTGTACCTTTCATAAATCCTTTTAAGCCCTCCATCA
GAGATTTTTTTCCAATGGCTTGGATTTTCCTTGCACTTTCCAAAGAAATC
TGCCATGAGTTCAGCTTTTTTTTAAAAGAAATTTATAATTCTATAAATCG
AATGAATTGAATATTATGATACATGCGTGGAGCTAACAACACAGCTTGGC
TTTAACTTG
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