DN617454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: RGA2_BRACM (DELLA protein RGA2 OS=Brassica campestris GN=RGA2 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.895e-15 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRD-----VLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ DK + +E + + + I N++ACEG +RVERHE L +W +RF +GF P L +NA + L + YRVEEN+G L LGW R + T+SAWK Sbjct: 469 LFDSLEGVPSSQDK--VMSEVY-LGKQICNLVACEGPDRVERHETLSQWANRFGSSGFAPAHLG---SNAFKQASMLLALFNGGEGYRVEENNGCLMLGWHTRPLITTSAWK 574
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL34_ARATH (Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 41/108 (37.96%), Postives = 60/108 (55.56%), Query Frame = -3 Query: 262 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKD--YDSNYRVEENDGALYLGWRNRAMATSSAW 579 +F+ D T PRD+K+RI E+ R+ +N+IACE +RVER E +W+ R + AGF + P + R LK Y ++ V+EN L GW+ R + SS W Sbjct: 520 LFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYASSCW 627
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ +D R+ +E + R I+N++ACEG +RVERHE L +WR+RF + GF P + +L Y Y VEEN+G L LGW+ R + +SAW+ Sbjct: 402 LFDSLEGPPSQD---RVMSELF-LGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: GAI_SOLLC (DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = -3 Query: 259 RPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 555 +P + Q + + + R I N++ACEG +RVERHE L +WR R +GF P L +L + YRVEENDG L LGW R + +SAWK Sbjct: 474 QPPVNNQDLVMSEVYLGRQICNVVACEGSDRVERHETLNQWRVRMNSSGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENDGCLMLGWHTRPLIATSAWK 574
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: RGA1_BRACM (DELLA protein RGA1 OS=Brassica campestris GN=RGA1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYD--SNYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ DK + +E + + + I N++ACEG +RVERHE L +W +RF +GF P L +L ++ YRVEEN+G L L W R + T+SAWK Sbjct: 463 LFDSLEGAPSSQDK--VMSEVY-LGKQICNLVACEGPDRVERHETLSQWSNRFGSSGFAPAHLGSNAFKQASTLLALFNGGEGYRVEENNGCLMLSWHTRPLITTSAWK 568
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: DWRF8_MAIZE (DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.133e-14 Identity = 39/86 (45.35%), Postives = 49/86 (56.98%), Query Frame = -3 Query: 259 VARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 510 + R I N++ACEG ER ERHE LG+WRSR +GF P L +L + YRVEE DG L LGW R + +SAW+ Sbjct: 538 LGRQICNVVACEGAERTERHETLGQWRSRLGGSGFAPVHLGSNAYKQASTLLALFAGGDGYRVEEKDGCLTLGWHTRPLIATSAWR 623
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.480e-14 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = -3 Query: 262 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRL-SPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAW 579 +F+ D R+D+ R+ E+ R+IVN++ACEG ERVER E +W++R + AGF L L+ N + YD N+ V++N L GW+ R + SS W Sbjct: 658 VFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: RGA_ARATH (DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.933e-14 Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -3 Query: 250 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS--NYRVEENDGALYLGWRNRAMATSSAWK*KT 579 +F+S++ DK + +E + + + I N++ACEG +RVERHE L +W +RF +G P L +L ++S YRVEE++G L LGW R + T+SAWK T Sbjct: 476 LFDSLEGVPNSQDK--VMSEVY-LGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWKLST 584
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.525e-14 Identity = 38/86 (44.19%), Postives = 49/86 (56.98%), Query Frame = -3 Query: 259 VARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 510 + R I N++ACEG ER ERHE LG+WR+R AGF P L +L + YRVEE +G L LGW R + +SAW+ Sbjct: 536 LGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAWR 621
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: GAIPB_CUCMA (DELLA protein GAIP-B OS=Cucurbita maxima GN=GAIPB PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.306e-14 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS--NYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ + DK + + + I N++ACEG +RVE HE L +WR+R +GF P L +L + S YRVEEN+G+L LGW R + +SAWK Sbjct: 472 LFDSLESSPNNQDKMM---SEMYLGKQICNVVACEGSDRVEWHETLTQWRTRLCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIVTSAWK 577 The following BLAST results are available for this feature:
BLAST of DN617454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617454 ID=DN617454; Name=DN617454; organism=Citrus sinensis; type=EST; length=581bpback to top |