DN617454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 9.206e-41 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 MFESIDVT PRD KQRI+ EQHC+ARD+VN+IACEG +RVERHELLGKWRSRF MAGFTPY LSPLV + ++ +L++Y YR+EE DGALYLGW +R + S AWK Sbjct: 384 MFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.625e-37 Identity = 68/107 (63.55%), Postives = 87/107 (81.31%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 MFESIDV PR+ K+RI+ EQHC+ARD+VN+IACEG ER+ERHELLGKW+SRF MAGF PY LS +++ +R +L+DY + Y +EE DGALYLGW +R + +S AWK Sbjct: 307 MFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.682e-34 Identity = 65/107 (60.75%), Postives = 82/107 (76.64%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 +FESIDV RD K+RI+ EQHC+AR++VN+IACEG+ER ERHE LGKWRSRF MAGF PY LS V ++ +L+ Y Y +EE DGALYLGW+N+ + TS AW+ Sbjct: 491 VFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.746e-34 Identity = 65/106 (61.32%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 262 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAW 579 MFESID PRD+K+RIS EQHC+A+DIVN+IACEG +RVERHELLGKW+SR MAGF PY LS V + +R +L Y Y ++E DGA+ LGWR+R + ++SAW Sbjct: 465 MFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.428e-33 Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = -3 Query: 262 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAW 579 +FESID+T PRDD++RI+ EQHC+AR+IVN+IACEG ER ER+E GKW++R MAGF P LS LV +R +L+ Y NY++ E DGALYLGW++R + SSAW Sbjct: 438 IFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.405e-26 Identity = 50/108 (46.30%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLK-DYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 +FES+D+T PR+ ++R++ E+ C+ARDIVN++ACEG ER+ER+E GKWR+R MMAGF P +S VTN +++++K Y + Y+++E G L+ W +++ +SAW+ Sbjct: 486 VFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.186e-17 Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = -3 Query: 439 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLG 579 MFESID RPRDDKQRISAEQHCVARDIVNMIACE ERVERHE+LG Sbjct: 236 MFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLG 282
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 4.601e-16 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDY--DSNYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ + + R+ +E + + R I+N++A EG +RVERHE +WR R AGF P L +L Y YRVEENDG L +GW+ R + T+SAWK Sbjct: 438 LFDSLEDSYSLPSQDRVMSEVY-LGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima GN=GAIP PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.025e-15 Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDS--NYRVEENDGALYLGWRNRAMATSSAWK 579 +F+S++ + DK + + + I N++ACEG +RVERHE L +WR+R AGF P L +L + S YRVEEN+G+L LGW R + +SAWK Sbjct: 465 LFDSLECSPNSQDKMM---SEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWK 570
BLAST of DN617454 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15 Identity = 39/107 (36.45%), Postives = 62/107 (57.94%), Query Frame = -3 Query: 259 MFESIDVTRPRDDKQRISAEQHCVARDIVNMIACEGIERVERHELLGKWRSRFMMAGFTPYRLSPLVTNAVRDVLKDYDSNYRVEENDGALYLGWRNRAMATSSAWK 579 + ES++ T P + R E+ + R +VN +ACEGI+R+ER E+ GKWR R MAGF LS + +++ + V+E++G + GW RA+ +SAW+ Sbjct: 535 LLESVESTVPSTNSDRAKVEEG-IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640 The following BLAST results are available for this feature:
BLAST of DN617454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617454 ID=DN617454; Name=DN617454; organism=Citrus sinensis; type=EST; length=581bpback to top |