DN617414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.085e-26 Identity = 66/199 (33.17%), Postives = 101/199 (50.75%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGL---AYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P RPAF G AP L D LNQ RWA+G +E+ FSR+ P+ +G + L L AYA+ + +P SIP++ Y LP + L + I P IS L+ G + +WW +++ W+I G+S HLF ++ LLK L F VTSK DD+ ++Y+ + +P + + + +V Sbjct: 742 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDDDFGELYAFKWTTLLIPPTTVLIINIVGVV 940
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.850e-26 Identity = 64/169 (37.87%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDE 501 +CNP RPAF G AP L D LNQ RWA+G +E+ SR+CPI +G R L +AY + +PI SIP++ Y LP L + I P+IS L+ G + WW +++ W+I G S HLF + LLK L F VTSK D++ Sbjct: 796 YCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPITSIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDED 964
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.566e-25 Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGL---AYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVV---DDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P R AF G AP L D LNQ RWA+G +E+ FSR+ P+ +G + L L +Y + + +P S+P++ Y LP + L +G I P IS L+ G + +WW +++ W+I G+S HLF ++ LLK L F VTSK DDE +++Y+ + +P + L + +V Sbjct: 769 YCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVV 969
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.566e-25 Identity = 65/201 (32.34%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGL---AYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVV---DDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P R AF G AP L D LNQ RWA+G +E+ FSR+ P+ +G + L L +Y + + +P S+P++ Y LP + L +G I P IS L+ G + +WW +++ W+I G+S HLF ++ LLK L F VTSK DDE +++Y+ + +P + L + +V Sbjct: 769 YCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVV 969
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.566e-25 Identity = 62/169 (36.69%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDE 501 +C P PAF G AP L D LNQ RWA+G +E+ FSR+CPI +G R L AY + + +PI SIP+++Y LP + L + I P+IS L+ G +WW +++ W+I G+S HLF + +LK L F VTSK D++ Sbjct: 781 YCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASDED 949
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.772e-25 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDE 501 +C P RP F G AP L D LNQ RWA+G +E+ SR+CPI +G R L LAY + +PI SIP++ Y LP + L + I P+IS L+ G WW +++ W+I G S HLF + LLK L F VTSK D++ Sbjct: 791 YCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.772e-25 Identity = 63/169 (37.28%), Postives = 84/169 (49.70%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDE 501 +C P RP F G AP L D LNQ RWA+G +E+ SR+CPI +G R L LAY + +PI SIP++ Y LP + L + I P+IS L+ G WW +++ W+I G S HLF + LLK L F VTSK D++ Sbjct: 791 YCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLFASIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED 959
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.015e-24 Identity = 68/200 (34.00%), Postives = 97/200 (48.50%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLK-FLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P RPAF G AP L D LNQ RWA+G +E+ SR+CPI +G R L +AY + +PI SIP++ Y LP L + I P+IS L+ WW +++ W+I G S HLF + LLK F GI F VTSK D++ +++Y + +P + + + IV Sbjct: 783 YCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQGLLKVFAGIDT-NFTVTSKASDEDGDFAELYVFKWTSLLIPPTTILLVNLVGIV 981
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.261e-24 Identity = 63/202 (31.19%), Postives = 97/202 (48.02%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI---RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKLF 594 +C P RPAF G AP L D L+Q RWA+G +E+ SR+CP+ +G R L L+Y + +P S+P++ Y LP + L +G I P +S L+ G WW +++ W+I G+S HLF + +LK + F VT+K DD E ++Y + +P + L + +V F Sbjct: 704 YCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGF 905
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.261e-24 Identity = 63/202 (31.19%), Postives = 97/202 (48.02%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI---RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKLF 594 +C P RPAF G AP L D L+Q RWA+G +E+ SR+CP+ +G R L L+Y + +P S+P++ Y LP + L +G I P +S L+ G WW +++ W+I G+S HLF + +LK + F VT+K DD E ++Y + +P + L + +V F Sbjct: 704 YCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGF 905 The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bpback to top |