DN617414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 6.300e-59 Identity = 110/199 (55.28%), Postives = 138/199 (69.35%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591 FC P R AF GD+P +L+D+++Q KRWAIGLLEVA SRY PIT+G+++MGL TG+ Y Y+ W WS+P+++Y FLPQLAL S+FPK S+P QD LDF+LEGGT+ WWNDQR+W IRG S HLFG +E+ LK L +S GFNVTSK DD EQSK Y +E+ +FG S MF+ L AIV L Sbjct: 482 FCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYGVKSMGLVTGVGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNL 680
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.083e-58 Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591 FC+P + AFYGD+P L D++ Q RW++GLLEVAFSRY P+T+GI+ + L L Y HY+FWP W IP+++Y LPQ+AL G+S+FPK S+P QD DFLLEGGT+RKWWNDQR+W++RGLS FG E+ LK L +S G+NVTSK DD EQ K Y QE+ DFG S MF+ + AI+ L Sbjct: 453 FCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPFWCIPLVVYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMWMVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPITTVAIMNL 651
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.241e-56 Identity = 108/199 (54.27%), Postives = 135/199 (67.84%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV-VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591 FCNP + AFYGD+P LVDL+ Q RWA+GL E++FS+Y PIT+GI+++ L GL Y + F P WSIP+ +Y LPQLAL SG+S+FPK S+P QD DFLLEGGT+RKWWNDQR+ +I+GLS FG +E++LK L +S FNVTSK DDEQ K Y QE+ DFG S MF+ L AIV L Sbjct: 463 FCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYGIKSLDLLMGLGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNL 661
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 8.852e-37 Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKLF 594 + NP++ AF G APT L +L Q +RW+ G ++ S+Y P+ +G + L L Y Y W S+P+++Y+ L L L GI +FPK+S +FL GGTFR WWN+QR+WL R S LFG ++ + K LG+S F +T+KV ++E ++ Y +E+++FGV SPMF+ L ++ LF Sbjct: 459 YLNPEKQAFLGVAPTNLHQMLVQQRRWSEGDFQIMLSKYSPVWYGKGKISLGLILGYCCYCLWAPSSLPVLIYSVLTSLCLFKGIPLFPKVSSSWFIPFGYVTVAATAYSLAEFLWCGGTFRGWWNEQRMWLYRRTSSFLFGFMDTIKKLLGVSESAFVITAKVAEEEAAERYKEEVMEFGVESPMFLVLGTLGMLNLF 657
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 5.937e-33 Identity = 69/196 (35.20%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 F NP R AF G AP+TL + QHKRW+ G L + S+YC FG + L + Y W S+P + Y +P L L G +FP+I P + LL G T + WWN QR+W+++ ++ +L+G ++ + K +G+S F VT+KV +++K Y QE+L+FG SP +V +A A++ Sbjct: 467 FINPKRAAFLGLAPSTLAQNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICGLWAANSLPTLYYVVIPSLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSITSYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALL 662
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.323e-32 Identity = 67/196 (34.18%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLT-GLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 + P R AF G AP TL + QHKRW+ G + S++ FG + L + Y Y W S+P + Y +P L L G +FP+I P + LL G T + WWN QR+W+++ ++ +L+G ++ + K LG+S F +T+KV D +++K Y QE+L+FG SP FV +A A++ Sbjct: 462 YMEPQRAAFVGVAPATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAANSLPTIYYVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVALL 657
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.335e-29 Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGL-TGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIVKL 591 + NP R F G PT+L +L +KRW G L+++ SRY P G + L + Y+ FW + S P + Y +P L +GIS+FP+ + P + L G + +WWN QR+WLIR ++ +L T++ + LGIS GFN+T KV D + + Y + M++FG S MFV L A++ L Sbjct: 474 YYNPKRKGFLGMTPTSLGQILVLYKRWTEGFLQISLSRYSPFLLGHGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPWFIPFAYVMVAAYSCSLAESLQCGDSAVEWWNAQRMWLIRRITSYLLATIDTFRRILGISESGFNLTVKVTDLQALERYKKGMMEFGSFSAMFVILTTVALLNL 671
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28 Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P RPAF G AP L D LNQ RWA+G +E+ FSR+CPI +G R L AY + + +P+ SIP++LY LP + L +G I P+IS L+ G +WW +++ W+I G+S HLF + LLK L F VTSK D+E +++Y + +P + + + +V Sbjct: 789 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVV 987
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.403e-28 Identity = 69/199 (34.67%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P RPAF G AP L D LNQ RWA+G +E+ FSR+CPI +G R L AY + + +P+ SIP++LY LP + L +G I P+IS L+ G +WW +++ W+I G+S HLF + LLK L F VTSK D+E +++Y + +P + + + +V Sbjct: 789 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFTVTSKASDEEGDFAELYMFKWTTLLIPPTTILIINLVGVV 987
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.185e-27 Identity = 67/199 (33.67%), Postives = 102/199 (51.26%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ--SKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P RPAF G AP L D LNQ RWA+G +E+ FSR+CPI +G R L AY + + +P+ SIP+++Y LP + L +G I P+IS L+ G +WW +++ W+I G+S HLF + LLK L F VTSK D++ +++Y + +P + + + +V Sbjct: 797 YCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTILIINLVGVV 995 The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bpback to top |