DN617414

Overview
NameDN617414
Unique NameDN617414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2703 contig Csv1_Contig2703:595..1198. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.954e-24
Identity = 64/198 (32.32%), Postives = 98/198 (49.49%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P RPAF G AP  L D L+Q  RWA+G +E+ FS++CP+ +G       L   +Y +   +P  SIP++ Y  LP + L +G  I P+++                   L+    G     WW +++ W+I G+S HLF   + LLK L      F VTSK  DDE+ S++Y+ +     +P    + L    +V
Sbjct:  808 YCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVV 1005          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.857e-24
Identity = 64/200 (32.00%), Postives = 95/200 (47.50%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPI--TFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ---SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P R AF G AP  L D L+Q  RWA+G +E+  SR+CP+   +G R   L   AY +   +P  SIP++ Y  +P + L +G  I P ++                   L+    G +   WW +++ W+I G+S HLF   + LLK LG     F VTSK   DE     ++Y  +     VP    + + +  IV
Sbjct:  778 YCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIV 977          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.914e-23
Identity = 65/198 (32.83%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P  PAF G AP  L D L+Q  RWA+G +E+  SR+CPI +G       L  L+Y +   +P  SIP+++Y  LP + L +G  I P+IS                   L+          WW +++ W+I G+S HLF   + LLK L      F VTSK  DD E S++Y  +     +P    + + V  ++
Sbjct:  786 YCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYCSLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINVIGVI 983          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.500e-23
Identity = 64/202 (31.68%), Postives = 96/202 (47.52%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI---RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIVKLF 594
            +C P RPAF G AP  L D L+Q  RWA+G +E+  SR+CP+ +G    R   L  LAY +   +P  S+P++ Y  LP + L +G  I P +S                   L+    G +    W +++ W+I G+S HLF   +  LK L      F VTSK  DD E  ++Y  +     +P    + + +  +V  F
Sbjct:  699 YCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTSKTADDLEFGELYIVKWTTLLIPPTSLLIINLVGVVAGF 900          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.241e-22
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P  PAF G AP  L D L+Q  RWA+G +E+ FS +CP+ +G       L   +Y +   +P  SIP++ Y  LP + L +G  I P+++                   L+    G     WW +++ W+I G+S HLF   + LLK +      F VTSK  DDE+ S++Y+ +     +P    + L    +V
Sbjct:  809 YCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVV 1006          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P R AF G AP  L D L+Q  RWA+G +E+  SR+CPI +G       L   +Y +   +P  S+P+++Y  LP + L +G  I P+IS                   L+          WW +++ W+I G+S HLF   + LLK L   +  F VTSK  DD E S++Y  +     +P    + + +  ++
Sbjct:  804 YCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWTSLLIPPTTLLIINIVGVI 1001          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.621e-22
Identity = 64/200 (32.00%), Postives = 96/200 (48.00%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPI--TFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSK---IYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P RPAF G AP  L D L+Q  RWA+G +E+ FSR+CP+   +G +   L  LAY +   +P  SIP++ Y  +P + L +G  I P I+                   L+    G +    W +++ W+I G+S HLF   + LLK L      F VTSK   DE  +   +Y  +     +P    + L +  +V
Sbjct:  764 YCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVV 963          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.764e-22
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P R AF G AP  L D L+Q  RWA+G +E+ FS +CP+ +G       L   +Y +   +P  SIP++ Y  LP + L +G  I P+++                   L+    G     WW +++ W+I G+S HLF   + LLK +      F VTSK  DDE+ S++Y+ +     +P    + L    +V
Sbjct:  808 YCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVV 1005          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.764e-22
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P R AF G AP  L D L+Q  RWA+G +E+ FS +CP+ +G       L   +Y +   +P  SIP++ Y  LP + L +G  I P+++                   L+    G     WW +++ W+I G+S HLF   + LLK +      F VTSK  DDE+ S++Y+ +     +P    + L    +V
Sbjct:  808 YCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVV 1005          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.158e-22
Identity = 62/198 (31.31%), Postives = 94/198 (47.47%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQ-SKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P R AF G AP  L D L+Q  RWA+G +E+  SR+CPI +G       L   +Y +   +P  S+P+++Y  LP + L +G  I P+IS                   L+    G     WW +++ W+I G S HLF   + LLK L      F VTSK  DD   S++Y  +     +P    + + +  ++
Sbjct:  800 YCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLIVYCSLPAVCLLTGKFIVPEISNYAGILFMLMFISIAVTGILEMQWGGVGIDDWWRNEQFWVIGGASSHLFALFQGLLKVLAGVNTNFTVTSKAADDGAFSELYIFKWTTLLIPPTTLLIINIIGVI 997          
The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CESA6_ORYSJ2.954e-2432.32Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ORYSJ3.857e-2432.00Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA5_ARATH1.914e-2332.83Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA8_ARATH2.500e-2331.68Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA3_ORYSJ1.241e-2231.31Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA9_ARATH1.621e-2231.31Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA4_ARATH1.621e-2232.00Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA5_ORYSJ2.764e-2231.31Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI2.764e-2231.31Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA2_ARATH6.158e-2231.31Cellulose synthase A catalytic subunit 2 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bp
TTTTGCAATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCT
CGTTGATTTGCTAAATCAACACAAGCGATGGGCCATTGGCCTCCTTGAGG
TGGCCTTTTCCAGATACTGTCCCATAACCTTCGGGATCCGAACCATGGGC
TTAACGGGCCTAGCTTATGCTCATTATTCATTCTGGCCTATTTGGTCTAT
TCCAATAATGCTATATGCATTCCTCCCCCAGCTAGCTCTCGCCAGTGGAA
TCAGCATCTTCCCAAAGATTTCGGAACCAGGGTTTCTCCTGTACTTATTT
CTTTTCCTTGGAGCTTATGGACAAGATTGTCTAGATTTCCTATTGGAAGG
AGGTACATTTCGAAAATGGTGGAATGATCAGAGAATATGGCTAATAAGGG
GGCTTTCTTGTCACCTTTTTGGAACACTTGAGTACTTACTCAAGTTCTTG
GGAATTTCTGCATTTGGATTCAATGTGACCAGCAAAGTCGTTGATGATGA
ACAAAGCAAAATATATAGCCAAGAGATGCTTGATTTTGGAGTGCCATCGC
CTATGTTTGTGACACTGGCAGTGGCAGCAATAGTTAAACTTTTTCTCATT
TTCT
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