DN617414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 8.043e-22 Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C P AF G AP L D L+Q RWA+G +E+ SR+CPI +G L L+Y + +P S+P+++Y LP + L +G I P+IS L+ WW +++ W+I G+S HLF + LLK L F VTSK DD E S +Y + +P + + V ++ Sbjct: 801 YCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTLLIINVIGVI 998
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20 Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR + + L +AY + +P S+ +++Y FLP L+L SG I ++ L+ G +WW +++ WLI G S HL L+ LLK + F +TSK VDDE +++Y+ + +P + + + AI Sbjct: 844 YCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAI 1041
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20 Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR + + L +AY + +P S+ +++Y FLP L+L SG I ++ L+ G +WW +++ WLI G S HL L+ LLK + F +TSK VDDE +++Y+ + +P + + + AI Sbjct: 844 YCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAI 1041
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20 Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYS 519 +C R AF G AP L D L+Q RWA G +E+ FSR + M L ++Y + +P SI +++Y F+P L+L SG I K+ L+ G WW +++ WLI G S HL+ ++ LLK + F +T+K D+ IY+ Sbjct: 863 YCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYA 1035
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19 Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR + + L +AY + +P SI +++Y FLP L+L SG I ++ L+ G + +WW +++ WLI G S HL L+ LLK + F +TSK +DDE + +Y + +P + + + AI Sbjct: 864 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAI 1061
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19 Identity = 61/201 (30.35%), Postives = 92/201 (45.77%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV------VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C + AF G AP L D L+Q RWA G +E+ FSR I G + L +AY + +P SI I+ Y FLP L+L SG + ++ L+ G + +WW +++ WLI G S HL L+ +LK + F +TSK DDE + +Y + +P + L + AI+ Sbjct: 699 YCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAGPKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAIL 899
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.736e-19 Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSK----VVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR + + L +AY + +P SI +++Y FLP L+L SG I ++ L+ G + +WW +++ WLI G S HL L+ LLK + F +TSK DDE + +Y + +P + + + + AI Sbjct: 889 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAI 1086
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.736e-19 Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSK----VVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR + + L +AY + +P SI +++Y FLP L+L SG I ++ L+ G + +WW +++ WLI G S HL L+ LLK + F +TSK DDE + +Y + +P + + + + AI Sbjct: 889 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAI 1086
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19 Identity = 60/203 (29.56%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQ----EMLDFGVPSPMFVTLAVAAIVKLFL 597 +C R +F G AP L D L+Q RWA G +E+ FSR I R L LAY + +P S+ ++LY FLP +L SG I +S L+ G +WW +++ WLI G S HL+ ++ +LK + F +T+K D+ IY+ + +P + + + AIV F+ Sbjct: 825 YCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILASKRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFI 1027
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18 Identity = 62/200 (31.00%), Postives = 91/200 (45.50%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVP--SPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR R L +AY + +P S +++Y FLP L+L SG I ++ L+ G + +WW +++ WLI G S HL ++ LLK + F +TSK VDDE + +Y + +P + M V L A+ Sbjct: 864 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFASPRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAV 1063 The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bpback to top |