DN617414

Overview
NameDN617414
Unique NameDN617414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2703 contig Csv1_Contig2703:595..1198. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 8.043e-22
Identity = 63/198 (31.82%), Postives = 94/198 (47.47%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGI--RTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDD-EQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C P   AF G AP  L D L+Q  RWA+G +E+  SR+CPI +G       L  L+Y +   +P  S+P+++Y  LP + L +G  I P+IS                   L+          WW +++ W+I G+S HLF   + LLK L      F VTSK  DD E S +Y  +     +P    + + V  ++
Sbjct:  801 YCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQFWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYLFKWTSLLIPPMTLLIINVIGVI 998          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20
Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR   +    +   L  +AY +   +P  S+ +++Y FLP L+L SG  I   ++                   L+    G    +WW +++ WLI G S HL   L+ LLK +      F +TSK     VDDE +++Y+ +     +P    + + + AI
Sbjct:  844 YCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAI 1041          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.587e-20
Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR   +    +   L  +AY +   +P  S+ +++Y FLP L+L SG  I   ++                   L+    G    +WW +++ WLI G S HL   L+ LLK +      F +TSK     VDDE +++Y+ +     +P    + + + AI
Sbjct:  844 YCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASSKMKVLQRIAYLNVGIYPFTSVFLIVYCFLPALSLFSGQFIVQTLNVTFLTYLLIITITLCLLAMLEIKWSGIALEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKQLGDDVDDEFAELYAVKWTSLMIPPLTIIMINLVAI 1041          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.379e-20
Identity = 54/173 (31.21%), Postives = 81/173 (46.82%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYS 519
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR        + M L  ++Y +   +P  SI +++Y F+P L+L SG  I  K+                    L+    G     WW +++ WLI G S HL+  ++ LLK +      F +T+K   D+   IY+
Sbjct:  863 YCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFLASRKLMLLQRISYLNVGIYPFTSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQGLLKVMAGIEISFTLTAKAAADDNEDIYA 1035          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.284e-19
Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR   +    +   L  +AY +   +P  SI +++Y FLP L+L SG  I   ++                   L+    G +  +WW +++ WLI G S HL   L+ LLK +      F +TSK     +DDE + +Y  +     +P    + + + AI
Sbjct:  864 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSKMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGVEISFTLTSKSGGDDIDDEFADLYMVKWTSLMIPPITIIMVNLIAI 1061          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.190e-19
Identity = 61/201 (30.35%), Postives = 92/201 (45.77%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV------VDDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585
            +C  +  AF G AP  L D L+Q  RWA G +E+ FSR   I  G +   L  +AY +   +P  SI I+ Y FLP L+L SG  +   ++                   L+    G +  +WW +++ WLI G S HL   L+ +LK +      F +TSK        DDE + +Y  +     +P    + L + AI+
Sbjct:  699 YCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAGPKLKLLQRIAYLNVGIYPFTSIFILTYCFLPPLSLFSGHFVVETLTGSFLIYLLIITLSLCGLAVLEVKWSGISLEEWWRNEQFWLIGGTSAHLVAVLQGILKVIAGVEISFTLTSKSSTGGDDEDDEFADLYLFKWTALMIPPLTIIILNIVAIL 899          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.736e-19
Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSK----VVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR   +    +   L  +AY +   +P  SI +++Y FLP L+L SG  I   ++                   L+    G +  +WW +++ WLI G S HL   L+ LLK +      F +TSK      DDE + +Y  +     +P  + + + + AI
Sbjct:  889 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAI 1086          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.736e-19
Identity = 60/198 (30.30%), Postives = 92/198 (46.46%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSK----VVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR   +    +   L  +AY +   +P  SI +++Y FLP L+L SG  I   ++                   L+    G +  +WW +++ WLI G S HL   L+ LLK +      F +TSK      DDE + +Y  +     +P  + + + + AI
Sbjct:  889 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVRTLNVTFLTYLLVITLTMCMLAVLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDEADDEFADLYIVKWTSLMIPPIVIMMVNLIAI 1086          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.373e-19
Identity = 60/203 (29.56%), Postives = 92/203 (45.32%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQ----EMLDFGVPSPMFVTLAVAAIVKLFL 597
            +C   R +F G AP  L D L+Q  RWA G +E+ FSR   I    R   L  LAY +   +P  S+ ++LY FLP  +L SG  I   +S                   L+    G    +WW +++ WLI G S HL+  ++ +LK +      F +T+K   D+   IY+     +     +P  +   + + AIV  F+
Sbjct:  825 YCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAILASKRLKFLQRLAYLNVGIYPFTSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQGVLKVIAGIEISFTLTTKSGGDDNEDIYADLYIVKWSSLMIPPIVIAMVNIIAIVVAFI 1027          
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18
Identity = 62/200 (31.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query:    1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKV----VDDEQSKIYSQEMLDFGVP--SPMFVTLAVAAI 582
            +C   R AF G AP  L D L+Q  RWA G +E+ FSR        R   L  +AY +   +P  S  +++Y FLP L+L SG  I   ++                   L+    G +  +WW +++ WLI G S HL   ++ LLK +      F +TSK     VDDE + +Y  +     +P  + M V L   A+
Sbjct:  864 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAFFASPRMKILQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVIQGLLKVVAGIEISFTLTSKSGGEDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAV 1063          
The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CESA6_ARATH8.043e-2231.82Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLD1_ORYSJ2.587e-2030.30Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI2.587e-2030.30Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD3_ORYSJ3.379e-2031.21Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD2_ARATH1.284e-1930.30Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD6_ARATH2.190e-1930.35Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD2_ORYSJ3.736e-1930.30Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI3.736e-1930.30Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD4_ARATH6.373e-1929.56Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLD3_ARATH1.087e-1831.00Cellulose synthase-like protein D3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01C20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bp
TTTTGCAATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCT
CGTTGATTTGCTAAATCAACACAAGCGATGGGCCATTGGCCTCCTTGAGG
TGGCCTTTTCCAGATACTGTCCCATAACCTTCGGGATCCGAACCATGGGC
TTAACGGGCCTAGCTTATGCTCATTATTCATTCTGGCCTATTTGGTCTAT
TCCAATAATGCTATATGCATTCCTCCCCCAGCTAGCTCTCGCCAGTGGAA
TCAGCATCTTCCCAAAGATTTCGGAACCAGGGTTTCTCCTGTACTTATTT
CTTTTCCTTGGAGCTTATGGACAAGATTGTCTAGATTTCCTATTGGAAGG
AGGTACATTTCGAAAATGGTGGAATGATCAGAGAATATGGCTAATAAGGG
GGCTTTCTTGTCACCTTTTTGGAACACTTGAGTACTTACTCAAGTTCTTG
GGAATTTCTGCATTTGGATTCAATGTGACCAGCAAAGTCGTTGATGATGA
ACAAAGCAAAATATATAGCCAAGAGATGCTTGATTTTGGAGTGCCATCGC
CTATGTTTGTGACACTGGCAGTGGCAGCAATAGTTAAACTTTTTCTCATT
TTCT
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