DN617414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.050e-17 Identity = 53/173 (30.64%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYS 519 +C R AF G AP L D L+Q RWA G +E+ FS+ + R L +AY + +P SI +++Y FLP L L SG I + L+ G +WW +++ WLI G S HL ++ LLK + F +TSK +++ I++ Sbjct: 757 YCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAMFATRRLKFLQRVAYLNVGIYPFTSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQGLLKVIAGIEISFTLTSKASGEDEDDIFA 929
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.567e-17 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVV----DDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C R AF G AP L D L+Q RWA G +E+ FS+ + R L +AY + +P S+ +++Y LP L+L SG I + L+ G +WW +++ W+I G S HL L+ LLK + F +T+K DD +++Y + +P + + + A+V Sbjct: 733 YCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLASRRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALV 931
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.567e-17 Identity = 55/199 (27.64%), Postives = 89/199 (44.72%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVV----DDEQSKIYSQEMLDFGVPSPMFVTLAVAAIV 585 +C R AF G AP L D L+Q RWA G +E+ FS+ + R L +AY + +P S+ +++Y LP L+L SG I + L+ G +WW +++ W+I G S HL L+ LLK + F +T+K DD +++Y + +P + + + A+V Sbjct: 733 YCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLASRRLKFLQRMAYLNVGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPFAELYLIKWTSLFIPPLAVIGINIIALV 931
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 59/199 (29.65%), Postives = 88/199 (44.22%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVV-----DDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C R AF G AP L D L+Q RWA G +E+ FSR I R L +AY + +P S+ +++Y LP ++L SG I + L+ G T +WW +++ W+I G S H L+ LLK + F +TSK DDE + +Y + VP + + + AI Sbjct: 900 YCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAIFATRRMKFLQRVAYFNVGMYPFTSLFLIVYCILPAISLFSGQFIVQSLDITFLIYLLSITLTLCMLSLLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSSAPEDGDDEFADLYVVKWSFLMVPPLTIMMVNMIAI 1098
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16 Identity = 57/173 (32.95%), Postives = 82/173 (47.40%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCP-ITFGIRTMGLTGLAYAHYSFWP---IWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQS 507 F +PD PAF G P+ + + QH+RWA G +EV F++ P I F + LAY FW I SIP ++Y LP L + ++FPK P F++ G + + W+ Q +W I S LF + +LK LGIS GF V K + + +S Sbjct: 476 FISPDPPAFLGSTPSVGPEAIVQHRRWATGSIEVLFNKQSPLIGFRRKIKFRQRLAY----FWVLMCIRSIPELVYCLLPAYCLLNNSALFPK--GPCLGIIVTLVGMHCLYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRS 642
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.866e-16 Identity = 51/159 (32.08%), Postives = 74/159 (46.54%), Query Frame = 1 Query: 10 PDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSK 486 P R AF G AP L D L+Q RWA G +E+ FSR + R L +AY + +P S+ ++ Y LP ++L SG I ++S L+ G T +WW +++ W+I G S H L+ LLK + F +TSK Sbjct: 925 PRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASPRMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAVSLFSGKFIVQRLSATFLAFLLVITLTLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSK 1083
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 54/174 (31.03%), Postives = 79/174 (45.40%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPI--TFGIRTMGLTGLAYAHYSFWPIW---SIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQS 507 F +PD PAF G PT ++ + Q +RWA G +EV F++ P F + LAY FW + SIP ++Y LP L ++FPK P F+ G + + W+ Q +W I S LF + +LK LGIS GF + K + + +S Sbjct: 476 FISPDPPAFIGSTPTLGLEAIVQQRRWATGAIEVLFNKQSPFMGMFHGKIKFRQRLAY----FWALMCLRSIPELIYCLLPAYCLLHDSALFPK--GPCLCTIVTLVGMHCLYSLWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKS 643
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.173e-14 Identity = 53/175 (30.29%), Postives = 77/175 (44.00%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPI--TFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCL----DFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQS 507 + +P PAF G P + + Q +RWA GLLEV F++ P+ F + LAY + W + SIP ++Y LP L ++FPK CL +F+ G + + W+ Q W I+ LF + +LK LGIS F VT K + S Sbjct: 477 YISPKPPAFLGAMPPGGPEAMLQQRRWATGLLEVLFNKQSPLIGMFCRKIRFRQSLAYLYIFTWGLRSIPELIYCLLPAYCLLHNAALFPK------GVYLGIVVTLVGMHCLYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKKTMPKTMS 645
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.796e-13 Identity = 53/172 (30.81%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 10 PDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPI--TFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCL----DFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQS 507 PD PAF G P +++ Q +RWA GLLE+ F++ P+ F + LAY + W + SIP + Y LP L ++FPK CL +F+ G + + W+ Q I+ LF L+ +LK LGIS F VT K + + +S Sbjct: 480 PDPPAFLGCMPQGGPEVMVQQRRWATGLLEILFNKQSPLIGMFCRKIRFRQSLAYLYVFSWGLRSIPELFYCLLPAYCLLHNSALFPK------GVYLGIIITLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKKTMPETKS 645
BLAST of DN617414 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.913e-13 Identity = 48/194 (24.74%), Postives = 85/194 (43.81%), Query Frame = 1 Query: 1 FCNPDRPAFYGDAPTTLVDLLNQHKRWAIGLLEVAFSRYCPITFGIRTMGLTGLAYAHYSFWPIWSIPIMLYAFLPQLALASGISIFPKISEPXXXXXXXXXXXXXXQDCLDFLLEGGTFRKWWNDQRIWLIRGLSCHLFGTLEYLLKFLGISAFGFNVTSKVVDDEQSKIYSQEMLDFGVPSPMFVTLAVAAI 582 +C + AF G AP L + L Q RW+ G LE+ FS CP+ G R + +AY + + +P+ S+ ++ Y P + + GI K ++ G T W +++ ++I + + L +LK G+ F +T+K V S+ ++ E+ D +F T+ V A+ Sbjct: 593 YCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAGRRLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFA-ELYDVQWAPLLFPTIVVIAV 785 The following BLAST results are available for this feature:
BLAST of DN617414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617414 ID=DN617414; Name=DN617414; organism=Citrus sinensis; type=EST; length=604bpback to top |