DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BORPE (Lipid A export ATP-binding/permease protein msbA OS=Bordetella pertussis GN=msbA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA +K P+L+ DEATSALD+ +E ++ +L+ L RT++ IAHRL+T D IIVL+ GK++E G H +LL G YA L+ Q Sbjct: 522 SGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHGPHSELLAANGLYASLYNMQ 619
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BORPA (Lipid A export ATP-binding/permease protein msbA OS=Bordetella parapertussis GN=msbA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA +K P+L+ DEATSALD+ +E ++ +L+ L RT++ IAHRL+T D IIVL+ GK++E G H +LL G YA L+ Q Sbjct: 522 SGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHGPHSELLAANGLYASLYNMQ 619
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BORBR (Lipid A export ATP-binding/permease protein msbA OS=Bordetella bronchiseptica GN=msbA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA +K P+L+ DEATSALD+ +E ++ +L+ L RT++ IAHRL+T D IIVL+ GK++E G H +LL G YA L+ Q Sbjct: 522 SGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQASLERLMRGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHGPHSELLAANGLYASLYNMQ 619
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 51/104 (49.04%), Postives = 75/104 (72.12%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANN----RTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGG+KQR+A+ARA L+ P IL+ DEATSALD+ +E + L+S+ N+ R+ I IAHRL+T D I+ +++G+V+E GSH +LL+K G YA+L +QN+ Sbjct: 594 SGGQKQRIAIARAILRDPRILILDEATSALDAESEHNVKGVLRSIGNDSATKRSVIVIAHRLSTIQAADRIVAMDSGRVVEMGSHKELLSKDGLYARLTKRQND 697
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFT (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=msbA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL+ L RT++ IAHRL+T D+++V++ G++IE G+H DLL + G YA L+ Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLARDGLYAYLYSMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFA (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa GN=msbA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 48/98 (48.98%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL+ L RT++ IAHRL+T D+++V++ G++IE G+H DLL + G YA L+ Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLARDGLYAYLYSMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BLOPB (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia pennsylvanicus (strain BPEN) GN=msbA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 S G++QR+A+ARA L+ PIL+ DEATSALDS +E I +L +L NRTS+ IAHRL+T DEI+V+ENG ++E+G H L+ + G YAQL+ Q Sbjct: 484 SSGQRQRIAIARALLRDCPILIFDEATSALDSASEHIIHKSLDTLKKNRTSLIIAHRLSTVENADEILVIENGYIMERGVHKVLIRRQGIYAQLYKLQ 581
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_AZOSE (Lipid A export ATP-binding/permease protein msbA OS=Azoarcus sp. (strain EbN1) GN=msbA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = -2 Query: 171 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAI 485 SGG++QR+A+ARA LK PIL+ DEATSALD+ +E I AL + RT++ IAHRL+T Q D I+V+++G+++E+GSH +LL G YA+L Q A+ Sbjct: 493 SGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELLAAGGHYARLHAMQFREEPAV 597
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_USTMA (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Ustilago maydis GN=ATM1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.395e-21 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = -2 Query: 189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKS--LANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485 SGGEKQR+A+AR LK P +L DEATSALDS TE E++ + + LA+ +T+IF+AHRL T D IIVL+ G V EQG+HD L+ G Y LW Q+ Sbjct: 635 SGGEKQRLAVARLLLKNPSVLFFDEATSALDSYTETELMRNIHATLLADKKTAIFVAHRLRTISDSDFIIVLQGGGVKEQGTHDQLMDSKGLYWDLWQAQS 735
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_BRAJA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bradyrhizobium japonicum GN=ndvA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21 Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TE ++ AL + RT+ IAHRL T I+V ENG+V E G+ D+L+ K G +A+L Sbjct: 477 SGGERQRLSIARALLKDPPILILDEATSALDAVTEVKVNAALDEVMRGRTTFVIAHRLATIRNATRILVFENGRVTESGTFDELVAKGGHFAEL 570 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |