DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB25B_ARATH (ABC transporter B family member 25, mitochondrial OS=Arabidopsis thaliana GN=ABCB25 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.645e-48 Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = -2 Query: 153 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVKL 485 SGGEKQRVALAR FLK+P ILLCDEATSALDSTTEAEILNALK+LA+NRTSIFIAHRLTTAMQCDEI+VLENGKV+EQG HD+LL K+GRYAQLW QQN++ D +DAA+KL Sbjct: 617 SGGEKQRVALARTFLKSPAILLCDEATSALDSTTEAEILNALKALASNRTSIFIAHRLTTAMQCDEIVVLENGKVVEQGPHDELLGKSGRYAQLWTQQNSSVDMLDAAIKL 727
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.639e-39 Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGGEKQRVALARAFLK+P ILLCDEATSALDS TEAEI+ L+SLA+NRT IFIAHRLTTAMQCDEI+V+E GKV+E+G+H+ LL K+GRYA+LW QQN+ Sbjct: 577 SGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASNRTCIFIAHRLTTAMQCDEILVMEKGKVVEKGTHEVLLGKSGRYAKLWTQQNS 676
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB23B_ARATH (ABC transporter B family member 23, mitochondrial OS=Arabidopsis thaliana GN=ABCB23 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 5.639e-39 Identity = 78/103 (75.73%), Postives = 91/103 (88.35%), Query Frame = -2 Query: 177 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTAD 485 SGGEKQRVALARAFLK+P ILLCDEAT+ALDS TEAEI+ +SLA+NRT IFIAHRLTTAMQCDEIIV+E GKV+E+G+H LL K+GRYA+LW QQN+T + Sbjct: 575 SGGEKQRVALARAFLKSPAILLCDEATNALDSKTEAEIMKTFRSLASNRTCIFIAHRLTTAMQCDEIIVMEKGKVVEKGTHQVLLEKSGRYAKLWTQQNSTLE 677
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB7_MOUSE (ATP-binding cassette sub-family B member 7, mitochondrial OS=Mus musculus GN=Abcb7 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 3.209e-26 Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = -2 Query: 165 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGR-YAQLWGQQNNTADAIDA 485 SGGEKQRVA+ARA LK PP++L DEATS+LDS TE IL A++ + +RTSIFIAHRL+T + DEIIVL GKV E+G+H LL + Y ++W Q+N D+ Sbjct: 610 SGGEKQRVAIARAILKNPPVILYDEATSSLDSITEETILGAMRDVVKHRTSIFIAHRLSTVVDADEIIVLSQGKVAERGTHYGLLANSSSIYTEMWHTQSNRVQNQDS 717
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 5.474e-26 Identity = 59/101 (58.42%), Postives = 76/101 (75.25%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKA-GRYAQLWGQQNN 485 SGGEKQRVA+ARA LK PP++L DEATS+LDS TE IL A+K + +RTSIFIAHRL+T + DEIIVL+ GKV E+G+H LL Y+++W Q++ Sbjct: 610 SGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHRTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLLANPHSIYSEMWHTQSS 710
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB6_DICDI (ABC transporter B family member 6 OS=Dictyostelium discoideum GN=abcB6 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 7.149e-26 Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = -2 Query: 180 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTA 485 SGGEKQRV++ARA LK PPIL+ DEA+S+LD+ TE +I A+ ++ RT++ IAHRL+T + CDEI+VL+ G ++E+GSH LL G YA LW QQ +A Sbjct: 564 SGGEKQRVSIARALLKDPPILILDEASSSLDTFTERKIQQAINEVSKGRTTLVIAHRLSTIIHCDEILVLKGGHIVERGSHSYLLDFNGDYAHLWNQQQLSA 665
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.593e-25 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = -2 Query: 189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGR-YAQLWGQQN 485 SGGEKQRVA+ARA LK PP++L DEATS+LDS TE IL A++ + +RTSIFIAHRL+T + DEIIVL GKV E+G+H LL + Y+++W Q+ Sbjct: 610 SGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMRDVVKHRTSIFIAHRLSTVVDADEIIVLSQGKVAERGTHYGLLANSSSIYSEMWHTQS 709
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB6_XENTR (ATP-binding cassette sub-family B member 6, mitochondrial OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.080e-25 Identity = 54/104 (51.92%), Postives = 78/104 (75.00%), Query Frame = -2 Query: 174 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADA 485 SGGEKQRVA+AR LKAP I+L DEATSALD+ TE I +L + NRT+I +AHRL+T + D+I+VL+ G+++E+G H++LL K G YA +W +Q + +++ Sbjct: 719 SGGEKQRVAIARTILKAPQIILLDEATSALDTETERNIQASLAKVCANRTTIVVAHRLSTVINSDQILVLKEGQIVERGRHEELLLKGGVYAGMWQKQQSGSES 822
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_THIDA (Lipid A export ATP-binding/permease protein msbA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=msbA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.905e-25 Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEATSALDS +E + AL++L NRT++ IAHRL+T + + I+VLE G+++E G+H DLL K GRYAQL Q Sbjct: 479 SGGQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHADLLAKQGRYAQLHALQ 576
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA1_COLP3 (Lipid A export ATP-binding/permease protein msbA 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.761e-24 Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QRVA+ARA L P L+ DEATSALD+ +E I +AL++L NRTSI IAHRL+T D+IIV+E GK++EQG+H LL K G YAQL Sbjct: 503 SGGQRQRVAIARALLCDTPFLILDEATSALDTESERHIQDALQTLQQNRTSIVIAHRLSTIENADKIIVMEQGKIVEQGNHQSLLAKQGAYAQL 596 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |