DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_PSEPF (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas fluorescens (strain Pf0-1) GN=msbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21 Identity = 48/94 (51.06%), Postives = 71/94 (75.53%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA LK P+L+ DEATSALD+ +E I AL + RT++ IAHRL+T + D I+V++ G+++E+G+HDDLL + G YA+L Sbjct: 494 SGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHDDLLAQNGYYARL 587
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_MANSM (Lipid A export ATP-binding/permease protein msbA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=msbA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21 Identity = 50/100 (50.00%), Postives = 73/100 (73.00%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGG++QR+A+ARA L+ P+L+ DEATSALD+ +E I AL+ L +RT + IAHRL+T + DEI+V+++G++ E+GSH++LL G Y QL Q N Sbjct: 485 SGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQAALEELQKDRTVLVIAHRLSTIEKADEILVIDHGEICERGSHEELLALNGAYKQLHKMQFN 584
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_HAES1 (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus somnus (strain 129Pt) GN=msbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21 Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGG++QR+A+ARA L+ P+L+ DEATSALD+ +E I AL++L +RT + IAHRL+T + DEI+V+E G++ E+GSH +LL G Y QL Q N Sbjct: 482 SGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQAALETLQKDRTVLVIAHRLSTIEKADEILVIEQGEIKERGSHQELLALNGAYKQLHSTQFN 581
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_ASPFU (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus fumigatus GN=atm1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.822e-21 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANN--RTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGGEKQR+A++R LK P +L DEATSALD+ TE +L + S+ RTS+F+AHRL T D+I+VL++G+V E GSH +LL G YA+LW Q Sbjct: 594 SGGEKQRLAISRLILKDPELLFFDEATSALDTYTEQALLQNINSILKEKKRTSVFVAHRLRTIYDSDQILVLKDGRVAEMGSHRELLDLNGIYAELWNAQ 693
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: YWJA_BACSU (Uncharacterized ABC transporter ATP-binding protein ywjA OS=Bacillus subtilis GN=ywjA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 50/94 (53.19%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG+KQR+++AR FLK P IL+ DEATSALD+ TEA I AL+ L+ RT++ IAHRL T D I+V+ N + EQG H DL+ G Y++L Sbjct: 471 SGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGRHQDLIEAGGLYSRL 564
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XANOR (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae GN=msbA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 46/98 (46.94%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL L +RT++ IAHRL+T D+++V++ G+++E+G+H +LL + G Y+ L G Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELLAQGGLYSHLHGMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XANOM (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 46/98 (46.94%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL L +RT++ IAHRL+T D+++V++ G+++E+G+H +LL + G Y+ L G Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELLAQGGLYSHLHGMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SYNAS (Lipid A export ATP-binding/permease protein msbA OS=Syntrophus aciditrophicus (strain SB) GN=msbA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+++ARA LK PIL+ DEATS+LD+ E E+ AL+ L RT++ IAHRL+T D I+VL G+++E+G+H+ LL + G Y +L Sbjct: 489 SGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKL 582
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_POLSJ (Lipid A export ATP-binding/permease protein msbA OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=msbA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = -2 Query: 201 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW 485 SGG++QR+A+ARA K PIL+ DEATSALD+ +E + A+K L +RTS+ IAHRL+T D II++E G++IE G+H +LL + G YA L+ Sbjct: 488 SGGQRQRLAIARALYKNAPILVLDEATSALDTESELAVQEAIKRLTASRTSLVIAHRLSTVQHADRIIMMEAGRMIESGTHAELLARNGAYAHLY 582
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_METCA (Lipid A export ATP-binding/permease protein msbA OS=Methylococcus capsulatus GN=msbA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEATSALD+ +E + AL+ L NRT++ IAHRL+T D+I V+ G++IE G+H L+ G YA L+ Q Sbjct: 487 SGGQRQRIAIARALLKNAPILILDEATSALDAESERYVQQALEVLMQNRTTLVIAHRLSTIQNADQICVMRGGRIIECGTHAQLMAARGGYADLYAMQ 584 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |