DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.380e-21 Identity = 48/94 (51.06%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG+KQR+A+ARA LK P ILL DEATSALD+++E+ + AL + RT++ +AHRL T D I V++ G+V+E G+H++L+ K+G YA L Sbjct: 505 SGGQKQRIAIARAMLKDPKILLLDEATSALDASSESIVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKSGAYASL 598 HSP 2 Score: 95.5153 bits (236), Expect = 1.306e-19 Identity = 47/95 (49.47%), Postives = 71/95 (74.74%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTK-AGRYAQL 485 SGG+KQR+A+ARA LK P +LL DEATSALD+ +E + AL+ L RT++ +AHRL+T D I V+++G+++EQGSH +L+++ G Y++L Sbjct: 1150 SGGQKQRIAIARAVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPEGAYSRL 1244
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: YKNV_BACSU (Uncharacterized ABC transporter ATP-binding protein yknV OS=Bacillus subtilis GN=yknV PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = -2 Query: 180 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTA 485 S G++Q ++ ARA L P I++ DEAT+++D+ TE +I ALK+L RT++ IAHRL+T D IIVL++G+ IE+G+HD LL K G YA L Q +TA Sbjct: 501 SAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIYAGLVKAQYSTA 602
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BURXL (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia xenovorans (strain LB400) GN=msbA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA K PIL+ DEATSALDS +E + AL++L RT++ IAHRL+T + D I+V+E G+++E GSH +LL + G YA L Sbjct: 494 SGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVMEAGRIVESGSHRELLAQDGLYAHL 587
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_ASPOR (Iron-sulfur clusters transporter atm1, mitochondrial OS=Aspergillus oryzae GN=atm1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANN--RTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGGEKQR+A++R LK P +L DEATSALD+ TE +L + S+ + RTS+F+AHRL T D+I+VL+ G+V E GSH +LL G YA+LW Q Sbjct: 590 SGGEKQRLAISRLILKDPELLFFDEATSALDTYTEQALLQNINSVLKDKARTSVFVAHRLRTICDSDQILVLKEGRVAETGSHRELLELDGIYAELWNAQ 689
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB8B_ARATH (Putative ABC transporter B family member 8 OS=Arabidopsis thaliana GN=ABCB8 PE=5 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.108e-21 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG+KQR+A+ARA ++ P ILL DEATSALD +E I NAL +A RT++ +AH+L+T + I +LENG V E GSH+DL+TK YA+L Sbjct: 500 SGGQKQRIAIARAIIRNPVILLLDEATSALDGESETLIQNALDQVAAGRTTLVVAHKLSTVRGANIIAMLENGSVRELGSHEDLMTKNNHYAKL 593 HSP 2 Score: 89.7373 bits (221), Expect = 7.166e-18 Identity = 46/96 (47.92%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSL--ANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG+KQR+A+ARAFL++P ILL DE TS+LDS +E E+ +AL + + N T++ +AHRL T D I ++ +G VIE GS+D L G++++L Sbjct: 1138 SGGQKQRIAIARAFLRSPIILLLDEVTSSLDSNSEQEVQDALARIMASRNMTTVVVAHRLNTLKNLDCIALIVDGTVIETGSYDHLKNIGGQFSRL 1233
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPB (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB18) GN=ndvA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++ AL + RT+ IAHRL+T I+V E G+VIE G+ D+LL + G +A L Sbjct: 483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFEAGRVIESGTFDELLARQGHFAAL 576
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHIRD (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium radiobacter GN=ndvA PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+A+ARA LK PIL+ DEATSALD TEA + A+ +L NRT+ IAHRL+T D ++ L+ G++IE+G+ D+L + GR+ L Sbjct: 473 SGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLDQGRIIEKGTFDELTQRGGRFTSL 566
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_AGRT5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndvA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 48/94 (51.06%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+A+ARA LK PIL+ DEATSALD TEA + A+ +L NRT+ IAHRL+T D ++ L+ G++IE+G+ D+L + GR+ L Sbjct: 473 SGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAVDALRKNRTTFIIAHRLSTVRDADLVLFLDQGRIIEKGTFDELTQRGGRFTSL 566
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XANCP (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris GN=msbA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL L +RT++ IAHRL+T D+++V++ G+++E+G+H +LL G Y+ L G Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHQELLALGGLYSHLHGMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XANC8 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. campestris (strain 8004) GN=msbA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 4.060e-21 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEAT+ALD+ +E + +AL L +RT++ IAHRL+T D+++V++ G+++E+G+H +LL G Y+ L G Q Sbjct: 486 SGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHQELLALGGLYSHLHGMQ 583 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |