DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_XANAC (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas axonopodis pv. citri GN=msbA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 45/98 (45.92%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK P+L+ DEAT+ALD+ +E + +AL L +RT++ IAHRL+T D+++V++ G+++E+G+H LL + G Y+ L G Q Sbjct: 486 SGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLLAQGGLYSHLHGMQ 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_PASMU (Lipid A export ATP-binding/permease protein msbA OS=Pasteurella multocida GN=msbA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGG++QR+A+ARA L+ P+L+ DEATSALD+ +E I AL+ L RT I IAHRL+T DEI+V+E+G++ E+GSH +LL G Y QL Q N Sbjct: 482 SGGQRQRLAIARALLRNSPVLILDEATSALDTESERSIQLALEKLQKERTVIVIAHRLSTIENADEILVIEHGEIKERGSHSELLALNGAYKQLHHIQVN 581
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_FRATT (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis GN=msbA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 46/95 (48.42%), Postives = 70/95 (73.68%), Query Frame = -2 Query: 201 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW 485 SGG++QR+++ARA LK P+L+ DEATSALD+ +E + AL+SL + T+I IAHRL+T D+I+V++ G+V+E G H +LL + G Y +L+ Sbjct: 510 SGGQRQRISIARALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVESGKHQELLEQGGLYTRLY 604
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_FRAT1 (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=msbA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 46/95 (48.42%), Postives = 70/95 (73.68%), Query Frame = -2 Query: 201 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW 485 SGG++QR+++ARA LK P+L+ DEATSALD+ +E + AL+SL + T+I IAHRL+T D+I+V++ G+V+E G H +LL + G Y +L+ Sbjct: 510 SGGQRQRISIARALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVESGKHQELLEQGGLYTRLY 604
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_NEUCR (Iron-sulfur clusters transporter atm-1, mitochondrial OS=Neurospora crassa GN=atm-1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 54/105 (51.43%), Postives = 68/105 (64.76%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAE-------ILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGGEKQR+A++R LK PP+L DEATSALD+ TE IL L +TS+F+AHRL T D IIVL+ G+V EQG+H +L+ + G YAQLW Q Sbjct: 587 SGGEKQRLAVSRLILKDPPLLFFDEATSALDTHTEQALMENINAILKGLGQKGEKKTSLFVAHRLRTIYDSDLIIVLKEGRVAEQGTHRELMERNGVYAQLWRAQ 691
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_GIBZE (Iron-sulfur clusters transporter ATM1, mitochondrial OS=Gibberella zeae GN=ATM1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGGEKQR+A++R LK PP+L DEATSALD+ TE ++ + S+ R TS+F+AHRL T D IIVL+ G V E G+H +L+ + G YA+LW Q Sbjct: 577 SGGEKQRLAVSRILLKDPPLLFFDEATSALDTHTEQALMMNINSILRERGRTSVFVAHRLRTIFDSDLIIVLKEGHVAEMGTHRELIDRDGVYAELWSAQ 676
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB5_DICDI (ABC transporter B family member 5 OS=Dictyostelium discoideum GN=abcB5 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = -2 Query: 201 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVI-EQGSHDDLLTKAGRYAQLW 485 SGGEKQRV++ARA LK PI+ DEATS+LD+ E I++AL+ L RT+I IAHRL+T + DEIIVL G +I E+G+H LL G+Y +W Sbjct: 598 SGGEKQRVSIARAILKDSPIVFYDEATSSLDTEKEKLIMDALRELFKGRTTIMIAHRLSTIVDADEIIVLGTGGIILERGNHQQLLELEGKYRSMW 693
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB21B_ARATH (ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 165 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLL-TKAGRYAQLWGQQNNTADAIDA 485 SGG+KQR+A+ARA LK P ILL DEATSALD+ +E + AL + NRT++ +AHRL+T D I V+ GK++E+GSH +LL G Y+QL Q +T D+ Sbjct: 543 SGGQKQRIAVARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHSELLRDPEGAYSQLIRLQEDTKQTEDS 650 HSP 2 Score: 94.7449 bits (234), Expect = 2.228e-19 Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLT-KAGRYAQL 485 SGG+KQRVA+ARA +K P +LL DEATSALD+ +E + +AL + NRT++ +AHRL+T D I V++NG ++E+G H+ L+ K G YA L Sbjct: 1189 SGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGVYASL 1283
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: YFIC_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiC OS=Bacillus subtilis GN=yfiC PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.925e-21 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 S G+KQ +++ARA L P +L+ DEATS +D+ TE I AL L RTS+ IAHRL T + D+I+VL+NG++IE+GSHD+L+ + G Y+ L+ Q Sbjct: 504 SQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYESQ 601
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1383_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1383 OS=Mycobacterium bovis GN=Mb1383 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 6.925e-21 Identity = 47/108 (43.52%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 162 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAA 485 SGGE+QR+ +ARA L P+L+ DEAT+ D +E + AL L +RT + IAHRL T + D+I+VL++G+++E+G+H++LL GRY +LW + A+ AA Sbjct: 747 SGGERQRLTIARAILGDTPVLILDEATAFADPESEYLVQQALNRLTRDRTVLVIAHRLHTITRADQIVVLDHGRIVERGTHEELLAAGGRYCRLWDTGQGSRVAVAAA 854 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |