DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.141e-23 Identity = 53/107 (49.53%), Postives = 77/107 (71.96%), Query Frame = -2 Query: 177 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW----GQQNNTAD 485 SGGEKQRVA+AR LKAP I+L DEATSALD++ E I +L + NRT+I +AHRL+T + D+I+V+++G ++E+G H+ LL++ G YA +W GQ+ + D Sbjct: 728 SGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGGVYADMWQLQQGQEETSED 834
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SALPA (Lipid A export ATP-binding/permease protein msbA OS=Salmonella paratyphi A GN=msbA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.491e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T Q DEI+V+E+G ++E+G+H +LL + G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLMIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_AGRVI (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium vitis GN=ndvA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = -2 Query: 150 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVKLG 485 SGGE+QR+A+ARA LK PIL+ DEATSALD TE + +A+ L NRT+ IAHRL+T + D+++ L++G+++E G +D+L K GR+A L D AVK+G Sbjct: 473 SGGERQRIAIARAILKDAPILVLDEATSALDVETEERVKSAIDRLRQNRTTFIIAHRLSTVREADQVLFLDHGRIVEMGGYDELSAKGGRFAALLHTSGLLNDDDKTAVKVG 584
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SHISS (Lipid A export ATP-binding/permease protein msbA OS=Shigella sonnei (strain Ss046) GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SHIFL (Lipid A export ATP-binding/permease protein msbA OS=Shigella flexneri GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SHIDS (Lipid A export ATP-binding/permease protein msbA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SHIBS (Lipid A export ATP-binding/permease protein msbA OS=Shigella boydii serotype 4 (strain Sb227) GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SALTY (Lipid A export ATP-binding/permease protein msbA OS=Salmonella typhimurium GN=msbA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T Q DEI+V+E+G ++E+G+H +LL + G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SALTI (Lipid A export ATP-binding/permease protein msbA OS=Salmonella typhi GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T Q DEI+V+E+G ++E+G+H +LL + G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SALCH (Lipid A export ATP-binding/permease protein msbA OS=Salmonella choleraesuis GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T Q DEI+V+E+G ++E+G+H +LL + G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |