DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ECOUT (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli (strain UTI89 / UPEC) GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ECOLI (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli (strain K12) GN=msbA PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ECOL6 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O6 GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ECOL5 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ECO57 (Lipid A export ATP-binding/permease protein msbA OS=Escherichia coli O157:H7 GN=msbA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/98 (55.10%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G ++E+G+H+DLL G YAQL Q Sbjct: 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQ 579
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: HMT1_SCHPO (Heavy metal tolerance protein OS=Schizosaccharomyces pombe GN=hmt1 PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 1.947e-23 Identity = 54/99 (54.55%), Postives = 73/99 (73.74%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTK-AGRYAQLWGQQ 485 SGGEKQRVA+ARA LK P I+L DEATSALD+ TE +I AL LA+ RT+I IAHRL+T D I+ + NG+++E G+H++L+ + G Y ++W QQ Sbjct: 722 SGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLASGRTAIVIAHRLSTITNADLILCISNGRIVETGTHEELIKRDGGAYKKMWFQQ 820
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPL (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Lens) GN=msbA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.543e-23 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEATSALDS +E I AL+ + N RT++ IAHRL+T +IIV+++G+++EQGSH +LL G YAQL+ Q Sbjct: 480 SGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMNGRTTLIIAHRLSTIKHAHKIIVMQHGRIVEQGSHQELLDMDGHYAQLYKVQ 577
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_IDILO (Lipid A export ATP-binding/permease protein msbA OS=Idiomarina loihiensis GN=msbA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.321e-23 Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I +AL +L NRT+I IAHRL+T DEI+V++NG++IE+G+H LL + G Y QL Q Sbjct: 480 SGGQRQRIAIARALLQDAPILILDEATSALDTESERHIQDALGTLRKNRTAIVIAHRLSTIENADEILVMDNGEIIERGTHQQLLDQEGAYFQLHNLQ 577
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ATM1_SCHPO (Iron-sulfur clusters transporter atm1, mitochondrial OS=Schizosaccharomyces pombe GN=atm1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 4.337e-23 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = -2 Query: 174 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSL--ANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW-------GQQNNTADA 485 SGGEKQR+A++R LK P IL DEATSALD+ TE +L + L +++TS+FIAHRL T CD I VLE G+V+EQGSH+ L+ K Y +W G+ N + DA Sbjct: 581 SGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIKGSHKTSVFIAHRLRTIKDCDIIFVLEKGRVVEQGSHEQLMAKNSVYTSMWHSQESPFGESNKSGDA 693
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y2003_STAA8 (Putative multidrug export ATP-binding/permease protein SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02003 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23 Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 Query: 189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485 SGG+KQR+++AR FL PPIL+ DEATSALD +E+ I AL L+ +RT++ +AHRL+T D+I+V+ENG ++E G+H +L+ K G Y L+ QN Sbjct: 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |