DN617323

Overview
NameDN617323
Unique NameDN617323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1956_STAAR (Putative multidrug export ATP-binding/permease protein SAR1956 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1924_STAAC (Putative multidrug export ATP-binding/permease protein SACOL1924 OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1866_STAAM (Putative multidrug export ATP-binding/permease protein SAV1866 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1866 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1847_STAA3 (Putative multidrug export ATP-binding/permease protein SAUSA300_1847 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1847 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1806_STAAW (Putative multidrug export ATP-binding/permease protein MW1806 OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1799_STAAB (Putative multidrug export ATP-binding/permease protein SAB1799c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1799c PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1788_STAAS (Putative multidrug export ATP-binding/permease protein SAS1788 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1683_STAAN (Putative multidrug export ATP-binding/permease protein SA1683 OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 50/99 (50.51%), Postives = 72/99 (72.73%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG+KQR+++AR FL  PPIL+ DEATSALD  +E+ I  AL  L+ +RT++ +AHRL+T    D+I+V+ENG ++E G+H +L+ K G Y  L+  QN
Sbjct:  479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 577
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_NITHX (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=ndvA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 5.665e-23
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = -2 
Query:  177 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTAD 485
            SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++  AL  +   RT+  IAHRL+T      I+V ENG+VIE G+ D+LL + G +A+L   Q  T D
Sbjct:  483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNAALDEVMKGRTTFVIAHRLSTIRNATRILVFENGRVIENGTFDELLARGGHFARLAKAQFMTQD 585
[Close]
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: Y1051_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1051 OS=Haemophilus influenzae GN=HI1051 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23
Identity = 52/99 (52.53%), Postives = 69/99 (69.70%), Query Frame = -2 
Query:  189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485
            SGG++QR+A+AR  LK  PILL DEATSALDS  E  I  +L  +  N+T I IAHRL+T    D +IVL+ G+++EQG+H +LL   G YA+LW  Q+
Sbjct:  507 SGGQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQESLDKMMENKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHAELLELNGLYAKLWNHQS 605
The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1956_STAAR5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1924_STAAC5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1866_STAAM5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1847_STAA35.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1806_STAAW5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1799_STAAB5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1788_STAAS5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
Y1683_STAAN5.665e-2350.51Putative multidrug export ATP-binding/permease pro... [more]
NDVA_NITHX5.665e-2352.43Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
Y1051_HAEIN7.398e-2352.53Uncharacterized ABC transporter ATP-binding protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bp
TATAGTCACCCATTTGTATATATANGTCAAAACAAAAAAATTACAAAGAT
TACAAAATTGAAAAGGTTACATCTACAGATTTTGCACGGATACAAAAGTA
TGCTCGAGCAATTTTACTTGTATGTATGTCACTAACTTTAGTTTTATGCT
CCTAATTTGACGGCTGCATCAATGGCATCCGCGGTATTATTTTGCTGTCC
CCATAGCTGAGCATATCTCCCTGCTTTTGTCAACAGATCATCATGGGAAC
CCTGTTCAATTACCTTCCCATTTTCCAGAACTATAATCTCATCGCACTGC
ATTGCAGTTGTGAGCCTGTGAGCTATGAAAATTGAAGTTCTATTATTTGC
CAGTGACTTCAATGCATTTAATATCTCAGCTTCAGTTGTGCTGTCAAGTG
CACTTGTAGCTTCATCACATAACAAAATAGGAGGTGCTTTTAAGAATGCA
CGGGCTAGGGCCACACGCTGCTTCTCACCACCACTT
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