DN617323

Overview
NameDN617323
Unique NameDN617323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN2_PSESM (Methionine import ATP-binding protein metN 2 OS=Pseudomonas syringae pv. tomato GN=metN2 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.638e-12
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD++ V++ G ++EQG   D+
Sbjct:  143 SGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGKVADV 229          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN1_PSE14 (Methionine import ATP-binding protein metN 1 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=metN1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.638e-12
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD++ V++ G ++EQG   D+
Sbjct:  143 SGGQKQRVGIARALATKPKILLCDEATSALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGKVADV 229          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MDLA_BUCBP (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=mdlA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.638e-12
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = -2
Query:  231 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR-TSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLL 485
            SGG+KQR+++ARA L    IL+ D A S++D+ TE  IL  LK+   N+ T I   HRL++ +  D IIV+ENG + + G H  L+
Sbjct:  475 SGGQKQRISIARALLLKSEILILDNALSSVDNKTEINILENLKTWKKNKNTIIMCTHRLSSLINSDLIIVIENGSITQIGKHKLLI 560          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MDL2_YEAST (ATP-dependent permease MDL2, mitochondrial OS=Saccharomyces cerevisiae GN=MDL2 PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 2.638e-12
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQCDEIIVL-ENGKVIEQGSHDDL 485
            SGG+KQR+A+ARA +K P IL+ DEATSALD  +E  I      L  ++  T + IAHRL+T  + + +IVL  +G V+E G   +L
Sbjct:  587 SGGQKQRIAIARALIKKPTILILDEATSALDVESEGAINYTFGQLMKSKSMTIVSIAHRLSTIRRSENVIVLGHDGSVVEMGKFKEL 673          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = -2
Query:  228 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLT 485
            S G++Q + LARA L    IL+ DEAT+A+D  T+  +   +++   +RT + IAHRL T M  D IIVL+NGKV E  S   LL+
Sbjct: 1411 SVGQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLLS 1496          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_RALEH (Methionine import ATP-binding protein metN OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metN PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANN--RTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK 485
            SGG+KQRV +ARA    P +LL DEATSALD  T   IL  LK +  +   T + I H++    Q CD + VLE G+V+E G   D+  +
Sbjct:  142 SGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSILELLKQINRDLGLTIVMITHQMEVIKQVCDRVAVLEAGRVVETGRVIDVFLR 231          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LEUMM (Methionine import ATP-binding protein metN OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=metN PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = -2
Query:  156 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVK 485
            SGG+KQRVA+ARA    P IL+ DEATSALD  T  +IL  LK L      T + I H +    +  +++ V++NG++IE+GS  ++  +  +  QL  +   TA  ID A++
Sbjct:  156 SGGQKQRVAIARALANDPEILISDEATSALDPRTTNQILALLKKLNQEFGLTIVLITHEMQAVKEVANKVAVMQNGEIIERGSLLEIFAQPKQ--QLTREFIETATNIDKAIE 266          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_DESHY (Methionine import ATP-binding protein metN OS=Desulfitobacterium hafniense (strain Y51) GN=metN PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = -2
Query:  249 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR---TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQG 485
            SGG+KQRV +ARA    P +LLCDEATSALD  T   ILN LK + N R   T I I H +    + C ++ V+   K+ EQG
Sbjct:  142 SGGQKQRVGIARALATNPKVLLCDEATSALDPQTTLSILNLLKDI-NQRFGLTIIMITHEMKVVKEICTDVAVIHESKIAEQG 223          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN4_OCEIH (Methionine import ATP-binding protein metN 4 OS=Oceanobacillus iheyensis GN=metN4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG+KQRVA+ARA    P +LL DEATSALD  T   IL+ L  +      T + I H +    + CD + V+ENG+VIE+G   D+
Sbjct:  142 SGGQKQRVAIARALSHEPEVLLSDEATSALDPDTTEAILDLLLRINKELGITILLITHEMNVIQRVCDRVAVMENGEVIEEGYTKDI 228          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = -2
Query:  204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485
            S G KQ + LARA L+   IL+ DEAT+++D  TE ++  AL+      T + IAHRL + M C  ++V++ G+V E G+   LL + G + +L
Sbjct: 1398 SVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAESGNPAQLLAQKGLFYRL 1491          

HSP 2 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 41/111 (36.94%), Postives = 55/111 (49.55%), Query Frame = -2
Query:  162 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNAL---KSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAA 485
            SGG+KQR++LARA  K   I L D+  +ALD+    ++   +     L    T I + H L    Q D I+VL NG + E GS+ DLL + G    L       A   DAA
Sbjct:  752 SGGQKQRLSLARAVYKKAAIYLLDDPLAALDAHVSQQVFKQVIGPSGLLQGTTRILVTHTLHVLPQADRILVLANGTIAEMGSYQDLLQRNGALVGLLDGARQPAGTHDAA 862          
The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METN2_PSESM2.638e-1243.68Methionine import ATP-binding protein metN 2 OS=Ps... [more]
METN1_PSE142.638e-1243.68Methionine import ATP-binding protein metN 1 OS=Ps... [more]
MDLA_BUCBP2.638e-1244.19Multidrug resistance-like ATP-binding protein mdlA... [more]
MDL2_YEAST2.638e-1245.98ATP-dependent permease MDL2, mitochondrial OS=Sacc... [more]
YCFI_YEAST3.445e-1245.35Metal resistance protein YCF1 OS=Saccharomyces cer... [more]
METN_RALEH3.445e-1244.44Methionine import ATP-binding protein metN OS=Rals... [more]
METN_LEUMM3.445e-1239.82Methionine import ATP-binding protein metN OS=Leuc... [more]
METN_DESHY3.445e-1248.19Methionine import ATP-binding protein metN OS=Desu... [more]
METN4_OCEIH3.445e-1245.98Methionine import ATP-binding protein metN 4 OS=Oc... [more]
MRP6_MOUSE4.499e-1239.36Multidrug resistance-associated protein 6 OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bp
TATAGTCACCCATTTGTATATATANGTCAAAACAAAAAAATTACAAAGAT
TACAAAATTGAAAAGGTTACATCTACAGATTTTGCACGGATACAAAAGTA
TGCTCGAGCAATTTTACTTGTATGTATGTCACTAACTTTAGTTTTATGCT
CCTAATTTGACGGCTGCATCAATGGCATCCGCGGTATTATTTTGCTGTCC
CCATAGCTGAGCATATCTCCCTGCTTTTGTCAACAGATCATCATGGGAAC
CCTGTTCAATTACCTTCCCATTTTCCAGAACTATAATCTCATCGCACTGC
ATTGCAGTTGTGAGCCTGTGAGCTATGAAAATTGAAGTTCTATTATTTGC
CAGTGACTTCAATGCATTTAATATCTCAGCTTCAGTTGTGCTGTCAAGTG
CACTTGTAGCTTCATCACATAACAAAATAGGAGGTGCTTTTAAGAATGCA
CGGGCTAGGGCCACACGCTGCTTCTCACCACCACTT
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