DN617323

Overview
NameDN617323
Unique NameDN617323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 35/87 (40.23%), Postives = 58/87 (66.67%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTK 485
            S G++Q ++LARA L+   IL  DEAT+++D  T++ I   ++    + T + IAHRL T + CD+I+VL +G+V+E  S  +LL++
Sbjct: 1373 SVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSR 1459          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_XANCP (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris GN=metN PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = -2
Query:  249 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQG 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD + VL+ GK++E G
Sbjct:  142 SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLVETG 223          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_XANC8 (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metN PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = -2
Query:  249 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQG 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD + VL+ GK++E G
Sbjct:  142 SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMEVIRRVCDRVAVLDAGKLVETG 223          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_XANC5 (Methionine import ATP-binding protein metN OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=metN PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = -2
Query:  249 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQG 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD + VL+ GK++E G
Sbjct:  142 SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMDVIRRVCDRVAVLDAGKLVETG 223          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_XANAC (Methionine import ATP-binding protein metN OS=Xanthomonas axonopodis pv. citri GN=metN PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = -2
Query:  249 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQG 485
            SGG+KQRV +ARA    P ILLCDEATSALD  T A +L  L  +      T + I H +    + CD + VL+ GK++E G
Sbjct:  142 SGGQKQRVGIARALATRPQILLCDEATSALDPQTTASVLQLLAQINRELGLTIVLITHEMDVIRRVCDRVAVLDAGKLVETG 223          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_PHOPR (Methionine import ATP-binding protein metN OS=Photobacterium profundum GN=metN PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG+KQRVA+ARA    P +LLCDEATSALD  T   IL+ L+ +    N T + I H +      C ++ ++ +G+++E+G   D+
Sbjct:  142 SGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSILDLLREINRELNLTILLITHEMDVVKGICSQVAIIGDGELVEKGPVGDI 228          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LACSS (Methionine import ATP-binding protein metN OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metN PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = -2
Query:  246 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGS 485
            SGG+KQRVA+ARA +  P ILLCDEATSALD  T   IL+ L  +      T + + H +    + C  I V+  G+VIE+G+
Sbjct:  142 SGGQKQRVAIARALISEPAILLCDEATSALDPKTTNSILSLLAKINQEMGITIVLVTHEMDAVRRICQRIAVMAAGRVIEEGT 224          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN3_BACCZ (Methionine import ATP-binding protein metN 3 OS=Bacillus cereus (strain ZK / E33L) GN=metN3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -2
Query:  156 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR---TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK-----AGRYAQLWGQQNNTADAIDAAVK 485
            SGG+KQRV +ARA    P +LLCDEATSALD  T  +IL+ L  + N R   T + I H +    + C+ + V+E GK++E G   D+          R+ Q      +T + I++ ++
Sbjct:  142 SGGQKQRVGIARALANNPQVLLCDEATSALDPETTDQILDLLLDI-NKRLGLTIVLITHEMHVIRKICNRVAVMEKGKIVETGPVLDVFRNPQQDITKRFVQQLTDSEDTNETIESLIE 259          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN3_BACCR (Methionine import ATP-binding protein metN 3 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metN3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -2
Query:  156 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR---TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK-----AGRYAQLWGQQNNTADAIDAAVK 485
            SGG+KQRV +ARA    P +LLCDEATSALD  T  +IL+ L  + N R   T + I H +    + C+ + V+E GK++E G   D+          R+ Q      +T + I++ ++
Sbjct:  142 SGGQKQRVGIARALANNPQVLLCDEATSALDPETTDQILDLLLDI-NKRLGLTIVLITHEMHVIRKICNRVAVMEKGKIVETGPVLDVFRNPKQDITKRFVQQLTDSEDTNETIESLIE 259          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN3_BACC1 (Methionine import ATP-binding protein metN 3 OS=Bacillus cereus (strain ATCC 10987) GN=metN3 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -2
Query:  156 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR---TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK-----AGRYAQLWGQQNNTADAIDAAVK 485
            SGG+KQRV +ARA    P +LLCDEATSALD  T  +IL+ L  + N R   T + I H +    + C+ + V+E GK++E G   D+          R+ Q      +T + I++ ++
Sbjct:  142 SGGQKQRVGIARALANNPQVLLCDEATSALDPETTDQILDLLLDI-NKRLGLTIVLITHEMHVIRKICNRVAVMEKGKIVETGPVLDVFRNPQQDITKRFVQQLTDSEDTNETIESLIE 259          
The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB11C_ARATH4.499e-1240.23ABC transporter C family member 11 OS=Arabidopsis ... [more]
METN_XANCP5.876e-1246.34Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANC85.876e-1246.34Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANC55.876e-1246.34Methionine import ATP-binding protein metN OS=Xant... [more]
METN_XANAC5.876e-1246.34Methionine import ATP-binding protein metN OS=Xant... [more]
METN_PHOPR5.876e-1241.38Methionine import ATP-binding protein metN OS=Phot... [more]
METN_LACSS5.876e-1245.78Methionine import ATP-binding protein metN OS=Lact... [more]
METN3_BACCZ5.876e-1236.13Methionine import ATP-binding protein metN 3 OS=Ba... [more]
METN3_BACCR5.876e-1236.13Methionine import ATP-binding protein metN 3 OS=Ba... [more]
METN3_BACC15.876e-1236.13Methionine import ATP-binding protein metN 3 OS=Ba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bp
TATAGTCACCCATTTGTATATATANGTCAAAACAAAAAAATTACAAAGAT
TACAAAATTGAAAAGGTTACATCTACAGATTTTGCACGGATACAAAAGTA
TGCTCGAGCAATTTTACTTGTATGTATGTCACTAACTTTAGTTTTATGCT
CCTAATTTGACGGCTGCATCAATGGCATCCGCGGTATTATTTTGCTGTCC
CCATAGCTGAGCATATCTCCCTGCTTTTGTCAACAGATCATCATGGGAAC
CCTGTTCAATTACCTTCCCATTTTCCAGAACTATAATCTCATCGCACTGC
ATTGCAGTTGTGAGCCTGTGAGCTATGAAAATTGAAGTTCTATTATTTGC
CAGTGACTTCAATGCATTTAATATCTCAGCTTCAGTTGTGCTGTCAAGTG
CACTTGTAGCTTCATCACATAACAAAATAGGAGGTGCTTTTAAGAATGCA
CGGGCTAGGGCCACACGCTGCTTCTCACCACCACTT
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