DN617323

Overview
NameDN617323
Unique NameDN617323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LACLM (Methionine import ATP-binding protein metN OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metN PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK 485
            SGG+KQRVA+ARA    P IL+ DE TSALD  T  +IL+ LKSL      T + I H +    +  +++ V++NG++IEQ S  D+  +
Sbjct:  161 SGGQKQRVAIARALANDPEILISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITHEMQVVKEIANKVAVMQNGEIIEQNSLIDIFAQ 250          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LACLA (Methionine import ATP-binding protein metN OS=Lactococcus lactis subsp. lactis GN=metN PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK 485
            SGG+KQRVA+ARA    P IL+ DE TSALD  T  +IL+ LKSL      T + I H +    +  +++ V++NG++IEQ S  D+  +
Sbjct:  161 SGGQKQRVAIARALANDPEILISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITHEMQVVKEIANKVAVMQNGEIIEQNSLIDIFAQ 250          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LACDB (Methionine import ATP-binding protein metN OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=metN PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG++QRVA+ARA    P ILL DEATSALD  T  +IL+ LK L      T + I H +    +  +++ V+ENG+V+E G+  D+
Sbjct:  150 SGGQQQRVAIARALANDPEILLSDEATSALDPQTTIQILDLLKKLNRELGLTIVLITHEMAAVKKIANKVAVMENGRVVENGNLRDV 236          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_LACDA (Methionine import ATP-binding protein metN OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=metN PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = -2
Query:  234 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDL 485
            SGG++QRVA+ARA    P ILL DEATSALD  T  +IL+ LK L      T + I H +    +  +++ V+ENG+V+E G+  D+
Sbjct:  150 SGGQQQRVAIARALANDPEILLSDEATSALDPQTTIQILDLLKKLNRELGLTIVLITHEMAAVKKIANKVAVMENGRVVENGNLRDV 236          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN1_BACC1 (Methionine import ATP-binding protein metN 1 OS=Bacillus cereus (strain ATCC 10987) GN=metN1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = -2
Query:  228 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLT 485
            SGG+KQRVA+ARA    P +LL DEATSALD  T   IL+ L  +      T + I H +    + CD + V+E+G V+E G+  D+ T
Sbjct:  142 SGGQKQRVAIARALSHEPEVLLSDEATSALDPETTDSILDLLLKINEEIGITILLITHEMNVIQRICDRVAVMEHGAVVESGTVKDIFT 230          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN1_BACAN (Methionine import ATP-binding protein metN 1 OS=Bacillus anthracis GN=metN1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = -2
Query:  228 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLT 485
            SGG+KQRVA+ARA    P +LL DEATSALD  T   IL+ L  +      T + I H +    + CD + V+E+G V+E G+  D+ T
Sbjct:  142 SGGQKQRVAIARALSHEPEVLLSDEATSALDPETTDSILDLLLKINEEIGITILLITHEMNVIQRICDRVAVMEHGAVVESGTVKDIFT 230          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MRP1_HUMAN (Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = -2
Query:  165 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNAL---KSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDA 485
            SGG+KQRV+LARA      I L D+  SA+D+     I   +   K +  N+T I + H ++   Q D IIV+  GK+ E GS+ +LL + G +A+      +T    DA
Sbjct:  769 SGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIVMSGGKISEMGSYQELLARDGAFAEFLRTYASTEQEQDA 878          

HSP 2 Score: 68.5514 bits (166), Expect = 1.710e-11
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = -2
Query:  213 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRY 485
            S G++Q V LARA L+   IL+ DEAT+A+D  T+  I + +++   + T + IAHRL T M    +IVL+ G++ E G+  DLL + G +
Sbjct: 1431 SVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEYGAPSDLLQQRGLF 1521          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_RHOFD (Methionine import ATP-binding protein metN OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metN PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANN--RTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK 485
            SGG+KQRV +ARA    P +LL DEATSALD  T   IL  L+ +  +   T + I H++    Q  D + V++ G+++EQG+  D+ T+
Sbjct:  142 SGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSILGLLRQINRDFGLTIVLITHQMQVIKQVADRVAVIDAGRIVEQGAVIDVFTR 231          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_RALSO (Methionine import ATP-binding protein metN OS=Ralstonia solanacearum GN=metN PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = -2
Query:  225 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLAN--NRTSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLLTK 485
            SGG+KQRV +ARA    P +LL DEATSALD  T   IL+ L+ +      T + I H++    Q CD + VL+ G+V+E G   D+  K
Sbjct:  143 SGGQKQRVGIARALASQPDVLLSDEATSALDPETTRSILDLLRKINRELGLTIVLITHQMEVIKQVCDRVAVLDAGRVVELGRVIDVFLK 232          
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: METN_MYXXD (Methionine import ATP-binding protein metN OS=Myxococcus xanthus (strain DK 1622) GN=metN PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = -2
Query:  231 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNR--TSIFIAHRLTTAMQ-CDEIIVLENGKVIEQGSHDDLL 485
            SGG+KQRV +ARA    P +LL DEATSALD  T   +L  L+ +      T + I H++      CD + VLE G+++EQG   +LL
Sbjct:  142 SGGQKQRVGIARALAPRPRVLLSDEATSALDPETTRSVLGLLRDINQKLGVTLLLITHQMDVVKAICDSVSVLERGRLVEQGKVTELL 229          
The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METN_LACLM7.674e-1243.33Methionine import ATP-binding protein metN OS=Lact... [more]
METN_LACLA7.674e-1243.33Methionine import ATP-binding protein metN OS=Lact... [more]
METN_LACDB7.674e-1244.83Methionine import ATP-binding protein metN OS=Lact... [more]
METN_LACDA7.674e-1244.83Methionine import ATP-binding protein metN OS=Lact... [more]
METN1_BACC17.674e-1243.82Methionine import ATP-binding protein metN 1 OS=Ba... [more]
METN1_BACAN7.674e-1243.82Methionine import ATP-binding protein metN 1 OS=Ba... [more]
MRP1_HUMAN1.002e-1136.36Multidrug resistance-associated protein 1 OS=Homo ... [more]
METN_RHOFD1.002e-1141.11Methionine import ATP-binding protein metN OS=Rhod... [more]
METN_RALSO1.002e-1143.33Methionine import ATP-binding protein metN OS=Rals... [more]
METN_MYXXD1.002e-1143.18Methionine import ATP-binding protein metN OS=Myxo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bp
TATAGTCACCCATTTGTATATATANGTCAAAACAAAAAAATTACAAAGAT
TACAAAATTGAAAAGGTTACATCTACAGATTTTGCACGGATACAAAAGTA
TGCTCGAGCAATTTTACTTGTATGTATGTCACTAACTTTAGTTTTATGCT
CCTAATTTGACGGCTGCATCAATGGCATCCGCGGTATTATTTTGCTGTCC
CCATAGCTGAGCATATCTCCCTGCTTTTGTCAACAGATCATCATGGGAAC
CCTGTTCAATTACCTTCCCATTTTCCAGAACTATAATCTCATCGCACTGC
ATTGCAGTTGTGAGCCTGTGAGCTATGAAAATTGAAGTTCTATTATTTGC
CAGTGACTTCAATGCATTTAATATCTCAGCTTCAGTTGTGCTGTCAAGTG
CACTTGTAGCTTCATCACATAACAAAATAGGAGGTGCTTTTAAGAATGCA
CGGGCTAGGGCCACACGCTGCTTCTCACCACCACTT
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