DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPS (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB5) GN=ndvA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = -2 Query: 159 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAV 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++ AL + RT+ IAHRL+T I+V +NGKVIE G+ D+L+ + GR+A+L Q + AAV Sbjct: 483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGKVIESGTFDELVAQRGRFAELARAQFMVQEEARAAV 591
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_YERPS (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pseudotuberculosis GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 52/94 (55.32%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G+++E+G H +LL + G YAQL Sbjct: 482 SGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_YERPN (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 52/94 (55.32%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G+++E+G H +LL + G YAQL Sbjct: 482 SGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_YERPE (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 52/94 (55.32%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G+++E+G H +LL + G YAQL Sbjct: 482 SGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_YERPA (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 52/94 (55.32%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL L NRTS+ IAHRL+T + DEI+V+E+G+++E+G H +LL + G YAQL Sbjct: 482 SGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVIEDGRIVERGVHAELLVQQGVYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SODGM (Lipid A export ATP-binding/permease protein msbA OS=Sodalis glossinidius (strain morsitans) GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 50/94 (53.19%), Postives = 74/94 (78.72%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA L+ PIL+ DEATSALD+ +E I AL +L NRTS+ IAHRL+T + DEI+V+ G+++E+G+H++L+++ G YAQL Sbjct: 482 SGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQKALDALQKNRTSLVIAHRLSTIEKADEILVVVEGRIVERGNHEELMSRQGVYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_SHEDO (Lipid A export ATP-binding/permease protein msbA OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 52/98 (53.06%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ P+L+ DEATSALD+ +E I L +L +NRTSI IAHRL+T DEI+V++ GK+IE+G+H L+ K G YA L+ Q Sbjct: 500 SGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQLGLDNLRHNRTSIVIAHRLSTIESADEILVIDQGKIIERGTHASLIEKKGAYAGLYQMQ 597
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEATSALDS +E I AL+ + RT++ IAHRL+T +IIVL++G+++EQGSH +LL G YAQL+ Q Sbjct: 480 SGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGSHQELLDMDGHYAQLYKVQ 577
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPA (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Paris) GN=msbA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.398e-23 Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA LK PIL+ DEATSALDS +E I AL+ + RT++ IAHRL+T +IIVL++G+++EQGSH +LL G YAQL+ Q Sbjct: 480 SGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQVMKGRTTLIIAHRLSTIKHAHKIIVLQHGRIVEQGSHQELLDMDGHYAQLYKVQ 577
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVU (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus GN=msbA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22 Identity = 50/94 (53.19%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QRVA+ARA L+ P+L+ DEATSALD+ +E I +AL L N+T + IAHRL+T + D+I+V+++G V+E+GSH +L+ K G YAQL Sbjct: 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGSVVERGSHSELIEKDGAYAQL 575 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |