DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BURS3 (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia sp. (strain 383) GN=msbA PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22 Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA K PIL+ DEATSALDS +E + AL+ L RT++ IAHRL+T + D I+VLE GK++E+GSHD+LL G YA L Sbjct: 490 SGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLSTIERADRILVLEAGKIVEEGSHDELLRHGGLYAHL 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BURCA (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia cenocepacia (strain AU 1054) GN=msbA PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.262e-22 Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA K PIL+ DEATSALDS +E + AL+ L RT++ IAHRL+T + D I+VLE GK++E+GSHD+LL G YA L Sbjct: 490 SGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGRTTLVIAHRLSTIERADRILVLEAGKIVEEGSHDELLRHGGLYAHL 583
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485 SGG+KQR+++AR FLK PP+L+ DEATSALD +E I A+ LA +RT+ +AHRL+T D+I+V+ENG +IE G+HD+L+ +Y L+ QN Sbjct: 480 SGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLFTIQN 578
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisA53) GN=ndvA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = -2 Query: 159 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAV 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++ AL + RT+ IAHRL+T I+V +NG+VIE GS D+LL + G +A+L Q D+ +A+ Sbjct: 483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMKGRTTFVIAHRLSTIRHATRILVFDNGRVIESGSFDELLARRGYFAELAHAQFMVQDSARSAM 591
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP2 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain HaA2) GN=ndvA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = -2 Query: 147 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVKLGA 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++ AL + RT+ IAHRL+T I+V ENG+VIE G+ DDL+ + G +A+L Q + A+V A Sbjct: 483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDEVMRGRTTFVIAHRLSTIRHATRILVFENGRVIESGTFDDLVAQRGHFAELARAQFMVQEDARASVAAAA 595
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_VIBVY (Lipid A export ATP-binding/permease protein msbA OS=Vibrio vulnificus (strain YJ016) GN=msbA PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 50/94 (53.19%), Postives = 72/94 (76.60%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QRVA+ARA L+ P+L+ DEATSALD+ +E I +AL L N+T + IAHRL+T + D+I+V+++G V+E+GSH +L+ K G YAQL Sbjct: 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLSTIEKADQILVIDDGAVVERGSHSELIEKDGAYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_VIBCH (Lipid A export ATP-binding/permease protein msbA OS=Vibrio cholerae GN=msbA PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QRVA+ARA L+ P+L+ DEATSALD+ +E I AL L N+T + IAHRL+T Q DEI+V++ G++IE+G H DLL + G YAQL Sbjct: 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQDGAYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ALCBS (Lipid A export ATP-binding/permease protein msbA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=msbA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.648e-22 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = -2 Query: 201 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLW 485 SGG++QR+A+ARA LK P+L+ DEATSALDS +E I AL+ + RT++ IAHRL+T + D I+VL+ G++IEQGSH LL K G Y Q++ Sbjct: 481 SGGQRQRIAIARALLKDAPVLILDEATSALDSESEHHIQQALEQVMQGRTTLVIAHRLSTIEKADRIMVLDQGQLIEQGSHQQLLEKNGLYTQMY 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris GN=ndvA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.153e-22 Identity = 54/113 (47.79%), Postives = 76/113 (67.26%), Query Frame = -2 Query: 147 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVKLGA 485 SGGE+QR+++ARA LK PPIL+ DEATSALD+ TEA++ AL + RT+ IAHRL+T I+V +NGKVIE G+ D+L+ + G +AQL Q ++ +A+ A Sbjct: 483 SGGERQRLSIARALLKDPPILILDEATSALDAVTEAKLNLALDEVMKGRTTFVIAHRLSTIRDATRILVFDNGKVIESGTFDELVARGGAFAQLARAQFMVQESARSAMSSAA 595
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_THICR (Lipid A export ATP-binding/permease protein msbA OS=Thiomicrospira crunogena (strain XCL-2) GN=msbA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.153e-22 Identity = 54/99 (54.55%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 189 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQN 485 SGG++QR+A+ARAFLK PIL+ DEATSALD+ +E I A+ SL NRT I IAHRL+T D+I+VLE G + EQG+H +L+ Y+QL+ Q N Sbjct: 478 SGGQRQRLAIARAFLKNAPILIMDEATSALDNQSEKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALNSIYSQLYKQGN 576 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |