DN617323
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_DESPS (Lipid A export ATP-binding/permease protein msbA OS=Desulfotalea psychrophila GN=msbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+++ARA L PIL+ DEATSALD+ +E E+ AL++L NRT+ IAHRL+T I+V++ GK++E+GSH++LL G Y L+ Q Sbjct: 475 SGGQRQRISIARALLADAPILILDEATSALDTESEREVQKALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLKLEGEYQLLYNMQ 572
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ALHEH (Lipid A export ATP-binding/permease protein msbA OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=msbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = -2 Query: 186 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNN 485 SGG++QR+A+ARA LK PIL+ DEATSALDS +E I AL+ L RT++ IAHRL+T D I+VL+ G+V+E G+H +LL G YA L Q N Sbjct: 487 SGGQRQRIAIARALLKDAPILILDEATSALDSESEKRIQEALEKLMRGRTTLVIAHRLSTIEDADRIVVLDAGRVVETGTHRELLDHNGHYASLHRVQFN 586
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_ACIAD (Lipid A export ATP-binding/permease protein msbA OS=Acinetobacter sp. (strain ADP1) GN=msbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 51/94 (54.26%), Postives = 67/94 (71.28%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QR+A+ARA LK PIL+ DEATSALD+ +E I A NRT+I IAHRL+T D I+V++ G++IEQG+H +LL K G Y QL Sbjct: 474 SGGQRQRIAIARAILKNAPILILDEATSALDNESEHFIQKAFDEAMQNRTTIVIAHRLSTIENADRIVVMDKGQIIEQGTHQELLLKQGAYFQL 567
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: ABCB2_DICDI (ABC transporter B family member 2 OS=Dictyostelium discoideum GN=abcB2 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 51/98 (52.04%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG+KQRVA+ARA ++ P +LL DEATSALD+ +E + AL +++ RTSI IAHRL+T + D I+V++ GKV+E G+H+ LL + G YA+L +Q Sbjct: 1299 SGGQKQRVAIARAIIRNPKVLLLDEATSALDTVSEKVVQVALDNVSKGRTSIVIAHRLSTVIDADLIVVVKEGKVVELGTHETLLAENGFYAELVSRQ 1396 HSP 2 Score: 97.0561 bits (240), Expect = 4.489e-20 Identity = 51/110 (46.36%), Postives = 69/110 (62.73%), Query Frame = -2 Query: 156 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQNNTADAIDAAVK 485 SGG+KQR+A+ARA +K P ILL DEATSALDS E + +++ L RT+I IAHRL+T D+I V++ G ++E G+H +L G Y QL +Q D D K Sbjct: 614 SGGQKQRIAIARAMIKDPKILLLDEATSALDSQNELLVQQSIEKLMIGRTTIVIAHRLSTIQDADQIAVVKGGAIVEIGTHPELYALNGVYTQLVNRQQKGGDDGDKKKK 723
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 6.263e-22 Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKA-GRYAQLWGQQ 485 SGG+KQRVA+ARA LK P +LL DEATSALD++ E ++ AL L RT+I +AHRL+T + D I+VL GKV+E+GSH +L++K+ G Y +L Q Sbjct: 1146 SGGQKQRVAIARAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMKGRTTILVAHRLSTIRKADTIVVLHKGKVVEKGSHRELVSKSDGFYKKLTSLQ 1244 HSP 2 Score: 100.138 bits (248), Expect = 5.302e-21 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG+KQR+A+ARA L+ P ILL DEATSALD+ +E + AL ++ RT+I IAHRL+T D+I+VL +G+V E GSH +L+++ G YA L Sbjct: 512 SGGQKQRIAIARAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAHRLSTIRNVDKIVVLRDGQVRETGSHSELISRGGDYATL 605
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_WIGBR (Lipid A export ATP-binding/permease protein msbA OS=Wigglesworthia glossinidia brevipalpis GN=msbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 48/98 (48.98%), Postives = 73/98 (74.49%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ PIL+ DEATSALD +E ++ A+ + NRTS+ IAHR++T + D I+++E GK+IE G+H++L+ K G YAQ++ Q Sbjct: 481 SGGQRQRIAIARALLRDCPILILDEATSALDIESEIKVQKAIDKIRKNRTSLVIAHRISTIKKSDMILLVEKGKIIEYGNHNELIEKKGVYAQIYRLQ 578
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_VIBPA (Lipid A export ATP-binding/permease protein msbA OS=Vibrio parahaemolyticus GN=msbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 50/94 (53.19%), Postives = 71/94 (75.53%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGG++QRVA+ARA L+ P+L+ DEATSALD+ +E I AL L ++T + IAHRL+T + DEI+V+++G +IE+G+H DL+ K G YAQL Sbjct: 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKDKTVLVIAHRLSTIEKADEILVVDDGAIIERGNHADLIAKNGAYAQL 575
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_BORA1 (Lipid A export ATP-binding/permease protein msbA OS=Bordetella avium (strain 197N) GN=msbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 8.180e-22 Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA +K PIL+ DEATSALD+ +E ++ ++L L RT++ IAHRL+T D IIVL+ G+++E G+H +LL G YA L+ Q Sbjct: 490 SGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQSSLDRLMRGRTTLVIAHRLSTVQNADRIIVLDAGRIVEHGAHTELLAAGGLYATLYNMQ 587
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: NDVA_RHIEC (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndvA PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = -2 Query: 204 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQL 485 SGGE+QR+A+ARA LK PIL+ DEATSALD TEA + A+ +L NRT+ IAHRL+T + D ++ L++G+V+EQG D+L GR+A L Sbjct: 473 SGGERQRIAIARAILKDAPILVLDEATSALDVETEARVKAAIDNLRQNRTTFIIAHRLSTVREADMVLFLDDGRVVEQGGFDELSHSNGRFAAL 566
BLAST of DN617323 vs. ExPASy Swiss-Prot
Match: MSBA_PHOLL (Lipid A export ATP-binding/permease protein msbA OS=Photorhabdus luminescens subsp. laumondii GN=msbA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.068e-21 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = -2 Query: 192 SGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVIEQGSHDDLLTKAGRYAQLWGQQ 485 SGG++QR+A+ARA L+ P+L+ DEATSALD+ +E I AL L NRTS+ IAHRL+T DEI+V+E+G ++E+G H LL + G Y+QL Q Sbjct: 481 SGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVERGDHLSLLERNGVYSQLHRMQ 578 The following BLAST results are available for this feature:
BLAST of DN617323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617323 ID=DN617323; Name=DN617323; organism=Citrus sinensis; type=EST; length=486bpback to top |