CN185528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.950e-35 Identity = 80/171 (46.78%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRI 622 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRL 170
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.159e-35 Identity = 80/171 (46.78%), Postives = 113/171 (66.08%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRI 622 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.801e-35 Identity = 80/171 (46.78%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRI 622 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + +P+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.501e-34 Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRI 622 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ TYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D+ TG SKGYGFV+F DE EQ R++TE G + ++P+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.501e-34 Identity = 80/171 (46.78%), Postives = 111/171 (64.91%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFV-SGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVL-CSTRPMRI 622 SLW+GDL+P+M+E++I+ F GE V S K+IRN+ T GY F+EF A AE+ L NG +P + F+LN+ATYG ++ D+ P++++FVGDL DV D +L E F VY S +G KVV D TG SKGYGFV+F DE EQ R++TE G + +P+R+ Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG---KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.730e-34 Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSE--GYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGAGERRQ--DDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRI 622 +LW+GDL+PWM+ ++I ++ E V+ KV+R+K ++ Y F++F S AAAER L +N T +P F+LNWAT G + P+F+IFVGDL D L TFR++Y S AK++ D TG S+ YGFVRF E EQ ++ M G LC RP+RI Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRI 256
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.271e-33 Identity = 70/182 (38.46%), Postives = 112/182 (61.54%), Query Frame = 2 Query: 83 YGVAPDASSDGIRSLWIGDLQPWMEESYIASIFGHTGEFVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTEQNFRLNWATYGA-GERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 YG + D + +LW+G+L+PW+ E++I ++ G+ V K+IRN+ T + GY F+EF S A + + N +P T F+LNWA+ G E+ +++IFVGDL+ +V ++ + F + Y+S K AK++TD T S+GYGFVRF DE++Q ++ EM G +C RP+R+G Sbjct: 81 YGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVG 261
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.835e-32 Identity = 75/171 (43.86%), Postives = 109/171 (63.74%), Query Frame = 2 Query: 122 SLWIGDLQPWMEESYIASIFGHTGEFVSG-KVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMPSTE--QNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTE-MNGVLCSTRPMRI 622 SLW+GDL P+M+E++I F GE G K+I ++ T S GY F+E A+ +R +Q NG +P + + F+LN+ATYG +R + GP+F++FVGDL ++V DY L + F + S KGAKVVTD G S+GYGFV+F DE+EQ +++ E N +P+RI Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG---KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTD-PYGNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRI 173
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.530e-23 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 IRSLWIGDLQPWMEESYIASIFGHTGE-FVSGKVIRNKQTNFSEGYGFIEFVSHAAAERVLQTFNGTQMP--STEQNFRLNWATYGAGERRQDDGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNG 592 + SLW+G+L+P+M+E +I F GE V ++IR+K T + GYGF+E A ER L+ NG +P + + F+L+ + YG +Q + F++FV DL DV D +L E F +SS K+V D G SK GFV F E EQ R++ ++ G Sbjct: 1 MNSLWMGNLEPYMDEDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG----KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQKRALVDLQG 157
BLAST of CN185528 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19 Identity = 62/184 (33.70%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 125 LWIGDLQPWMEESYIASIFGHTGEF-VSGKVIRNKQTNF----------SEGYGFIEFVSHAAAERVLQTFNGTQMPS-TEQNFRLNWATYGAGERRQD-----DGPDFTIFVGDLAADVTDYVLQETFRAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQLRSMTEMNGVLCSTRPMRIG 625 L++GDL P +++ + I+ GE ++ +++ N N ++GY F++F S A L NG +P+ + +LNWAT G + +IFVGDLA +VT+ L E F Y+S AK+V D+ TG SKGYGFV+F + EQ +++EM GV + R +++G Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKVG 238 The following BLAST results are available for this feature:
BLAST of CN185528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185528 ID=CN185528; Name=CN185528; organism=Citrus sinensis; type=EST; length=625bpback to top |