DC887600
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.529e-31 Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQKGHKYCLL +LSSEVGWNYYDTIKELEKKR ER+QV Y R+KQL KLRVKAE+ A+E+LG QL+I+AP+KY Sbjct: 127 ALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLNKLRVKAEQVAQEKLGSQLDILAPVKY 205
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.527e-30 Identity = 63/79 (79.75%), Postives = 69/79 (87.34%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQ GHKYCLL RLSSEVGWN+YDTIKELE KR ERA V Y R+KQL KLRVKAEK AEE+LG QL+I+AP+KY Sbjct: 128 ALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.527e-30 Identity = 62/79 (78.48%), Postives = 69/79 (87.34%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQ GHKYCLL RLSSEVGWN+YDTIKELE KR ER+QV Y R+KQL KLR KAEK AEERLG QL+++AP+KY Sbjct: 128 ALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY 206
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.527e-30 Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQ GHKYCLL RLSSEVGWN+YDTIKELE KR ERAQ Y R+KQL+KLR KAEK AEE+LG QL+++AP+KY Sbjct: 128 ALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY 206
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.322e-28 Identity = 60/79 (75.95%), Postives = 67/79 (84.81%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQ GHKYCLL RLSSEVGWN+YDTIKELE KR ER+Q Y R+KQL KLR KAEK AEE+LG QL+++A IKY Sbjct: 128 ALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY 206
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_PICMA (60S ribosomal protein L13a OS=Picea mariana GN=RPL13A PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.132e-25 Identity = 53/79 (67.09%), Postives = 67/79 (84.81%), Query Frame = -1 Query: 3 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEIIAPIKY 239 ALKVLRLQ GHKYCLL RLS EVGW+++DTI ELE+KR +AQV+Y RRKQLAKLR KA + AE++L P++E++A +KY Sbjct: 128 ALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKRKAKAQVSYERRKQLAKLRSKAVELAEKQLAPEMELLASLKY 206
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_BOVIN (60S ribosomal protein L13a OS=Bos taurus GN=RPL13A PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 6.788e-12 Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = -1 Query: 18 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEII 239 ALKV+RL+ K+ L RL+ EVGW Y LE+KR E+A++ Y ++KQL +LR +AEK E+++G E++ Sbjct: 123 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNIEKKIGKFTEVL 196
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_PONAB (60S ribosomal protein L13a OS=Pongo abelii GN=RPL13A PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 1.512e-11 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = -1 Query: 18 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEII 239 ALKV+RL+ K+ L RL+ EVGW Y LE+KR E+A++ Y ++KQL +LR +AEK E+++ E++ Sbjct: 123 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLVRLRKQAEKNVEKKIDKYTEVL 196
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_HUMAN (60S ribosomal protein L13a OS=Homo sapiens GN=RPL13A PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.975e-11 Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = -1 Query: 18 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEII 239 ALKV+RL+ K+ L RL+ EVGW Y LE+KR E+A++ Y ++KQL +LR +AEK E+++ E++ Sbjct: 123 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTEVL 196
BLAST of DC887600 vs. ExPASy Swiss-Prot
Match: RL13A_MACFA (60S ribosomal protein L13a OS=Macaca fascicularis GN=RPL13A PE=2 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.400e-11 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = -1 Query: 18 ALKVLRLQKGHKYCLLXRLSSEVGWNYYDTIKELEKKRXERAQVAYXRRKQLAKLRVKAEKAAEERLGPQLEII 239 ALKV+RL+ K+ L RL+ EVGW Y LE+KR E+A++ Y ++KQL +LR +AEK E+++ +++ Sbjct: 123 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTTTLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTQVL 196 The following BLAST results are available for this feature:
BLAST of DC887600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887600 ID=DC887600; Name=DC887600; organism=Citrus sinensis; type=EST; length=239bpback to top |