DC887412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.495e-32 Identity = 69/117 (58.97%), Postives = 87/117 (74.36%), Query Frame = -1 Query: 196 LKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 537 LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F+ L R E+CK L IP +Q +LSMGMS DF+ A+E+GSTNVRIGSTIFG R+Y KK Sbjct: 139 LKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKK 255
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.115e-31 Identity = 70/119 (58.82%), Postives = 90/119 (75.63%), Query Frame = -1 Query: 196 KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 543 +PLKV+VQ+NTSGE+SK G+ PS + +V+H+ +CP+LEF GLMTIG D + P +F+ L R E+C+ LGIP EQ +LSMGMS DF+ AIE+GSTNVRIGSTIFG R+Y KK Sbjct: 137 EPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPSLEFVGLMTIGSFGHDLSQGPNPDFQRLLTLRRELCEKLGIPVEQVELSMGMSMDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.038e-31 Identity = 69/117 (58.97%), Postives = 86/117 (73.50%), Query Frame = -1 Query: 196 LKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 537 LKV+VQ+NTSGEESK G+ PS + +V+H++ CPNLEF GLMTIG D + P +F+ L R E+CK L IP +Q +LSMGMS DF+ AIE+GSTNVRIGS IFG R+Y KK Sbjct: 139 LKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMSVDFQHAIEVGSTNVRIGSMIFGERDYSKK 255
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.210e-30 Identity = 68/117 (58.12%), Postives = 85/117 (72.65%), Query Frame = -1 Query: 196 LKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGM--PDYTSTPE-NFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 537 LKV+VQ+NTSGE SK G+ P+ LV+H++ CP+LEF GLMTIG D + P +F+ L R E+C+ LG P EQ +LSMGMS DF+ AIE+GSTNVRIGSTIFG R+Y KK Sbjct: 139 LKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPSLEFVGLMTIGSFGHDLSQGPNPDFQVLLSLREELCRKLGAPPEQVELSMGMSVDFQHAIEVGSTNVRIGSTIFGERDYSKK 255
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 8.887e-30 Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = -1 Query: 196 KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQ--NCPN-LEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 543 K L +++QVNTSGEESKSG +P CL+LVKH + NC N L F GLMTIG P+ T +FK L C++ + K L IP + +LSMGMS DFE AIE GST+VR+GS IFG R+Y K Sbjct: 136 KKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKNSLNFLGLMTIGNPNATPDQPDFKCLVDCKNNISKQLNIPLDSIELSMGMSHDFEPAIEFGSTSVRVGSAIFGERDYSNK 254
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.848e-21 Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = -1 Query: 196 PLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYT-STPEN--FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 540 PL+VLVQVNTSGE++K G+E +L + + + C NL+F G MTIG D + ++ EN F+ L K R + G + +LSMGMS DF AI G+T+VR+GS +FGAREY K Sbjct: 127 PLRVLVQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKFDGFMTIGSFDNSHASGENPDFEKLFKVRQTWAEQTGESADSVELSMGMSDDFLQAIHQGATSVRVGSKLFGAREYKNK 244
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.218e-19 Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = -1 Query: 199 PLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPK 540 PL+VL+QVNTSGE SKSG+EP L + +S+ PNL GLM+I +PDY + F LA+ + ++ + Q D LSMGMSGD + AIE GST VRIG+ IFG R+Y + Sbjct: 123 PLQVLIQVNTSGEASKSGIEPQQLFTLAELISR-LPNLTLRGLMSIPENVPDYPAQLAAFTQLAELQQQLAQKY----PQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFGERDYSR 234
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = -1 Query: 205 KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 543 KPL+VL+QVNTSGE SKSGV + EL + +S+ PNL GLM+I + DY S F+ LA + + PE LSMGMSGD AIE GST VRIG+ IFGAR+Y Sbjct: 122 KPLQVLIQVNTSGEASKSGVTEAEVFELAELISR-LPNLTLRGLMSIPANVSDYESQLHEFQKLATLKQTL--EAQFPEIDT-LSMGMSGDMTAAIEAGSTMVRIGTAIFGARDY 232
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = -1 Query: 199 RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMP--DYTSTPENFKTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPK 546 +KPL VL+Q+N S E+SKSG++P+ L+L K + QN P+L GLM I P D + + F + ++ +AL P+ Q D LSMGM+ D AI+ GST VRIG+ IFGAR+Y K Sbjct: 118 KKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPHLCLRGLMAIPAPTDDLATQEQAFTQMHSLFEQLKQAL--PDAQIDTLSMGMTDDMASAIQCGSTMVRIGTAIFGARDYSK 233
BLAST of DC887412 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.575e-18 Identity = 57/117 (48.72%), Postives = 73/117 (62.39%), Query Frame = -1 Query: 199 PLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPEN---FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPK 540 PL V +QVNTSGEE+K GV PS LEL K V Q+ L GLMTIG + ++ F+ L+ R + LGIP + LSMGMS D+ LAI+ GS +VR+GS+IFG+R K Sbjct: 115 PLNVYIQVNTSGEENKGGVTPSKVLELCKQV-QDMKYLRLKGLMTIGSISNSQLSDHNPDFQVLSDLRESLQNELGIPLQ---LSMGMSSDYLLAIKYGSDSVRVGSSIFGSRPTEK 227 The following BLAST results are available for this feature:
BLAST of DC887412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887412 ID=DC887412; Name=DC887412; organism=Citrus sinensis; type=EST; length=558bpback to top |