CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21 Identity = 48/137 (35.04%), Postives = 80/137 (58.39%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 529 +R+ R+ + DPP SA P DN+ W A IIGPA TP++ G F L + F YP KPP V F++ ++H NV + G + LDIL++ WSP + VL +++S+ +P+ + ++LY +++ ++ + E Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRE 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 490 KR+Q E+ L M SA P+ DN++ W TI G T ++G + L ++F DYPFKPPKV F T +H NVD GN+ LDIL+D WS A + +LL+++S+ P++ +P+ A L+ Sbjct: 38 KRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.397e-21 Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 KR+ +E+ L M + SA P G+N++ WV TI GP T Y G + L + FP YP+ P V FLT +H NVD G + LDILKD WS + +LL+++S+ P+ +P+ A ++ + K Sbjct: 35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 50/135 (37.04%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGD-NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQL 520 KR++ E+ L M SA P D NL +W TI GP+ T Y+G F + ++FP +YP+ PP + F + ++H NVD +GN+ LDILKD WS + +LL+++S+ P+ +P+ A L+ +D ++ +L Sbjct: 31 KRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRL 165
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 490 KR+Q E+ L M SA P+ DN++ W TI G T ++G + L +TF DYPFK PKV F T +H NVD GN+ LDIL+D WS A + +LL+++S+ P++ +P+ A L+ Sbjct: 39 KRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 ++R++AELN +P + SAG DN LY W IIGP T Y+GG+F +TFP DYP +PPK+ F+T I+H NVD G+V + IL ++ W P T+ ++++V SM +P+ +P A + ED+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 ++R++AELN +P + SAG DN LY W IIGP T Y+GG+F +TFP DYP +PPK+ F+T I+H NVD G+V + IL ++ W P T+ ++++V SM +P+ +P A + ED+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 ++R++AELN +P + SAG DN LY W IIGP T Y+GG+F +TFP DYP +PPK+ F+T I+H NVD G+V + IL ++ W P T+ ++++V SM +P+ +P A + ED+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.310e-21 Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKH 511 KR+Q E+ +L + SA P DN L WV I GP TPY G F + + FP +YPF PP + FL+ ++H NVD +GN+ LDILK+ WS + +LL+++S+ P+ +P+ A L+ D ++ Sbjct: 11 KRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.310e-21 Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD-------------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 ++R++AELN +P + SAG DN LY W IIGP T Y+GG+F +TFP DYP +PPK+ F+T I+H NVD G+V + IL + W P T+ ++++V SM +P+ +P A + ED+ Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |