CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.632e-62 Identity = 107/144 (74.31%), Postives = 129/144 (89.58%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KRIQREMAELN+DPP DCSAGPKGDNLY+W+ATIIGP+GTPY+GGIFFLDI FP+DYPFKPPK+ F TRIYHCNVD+AG+++++IL+DSWSPALTITKVL A+RS+F P ++P +P IA LYL D+ KHD++A EWTLRFAK Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFAK 182
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50 Identity = 88/143 (61.54%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF +DYPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA YL ++A+HD++A +WT R+A Sbjct: 64 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50 Identity = 88/143 (61.54%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF +DYPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA YL ++A+HD++A +WT R+A Sbjct: 64 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.097e-50 Identity = 88/143 (61.54%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF +DYPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA YL ++A+HD++A +WT R+A Sbjct: 64 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E2_MOUSE (Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.192e-50 Identity = 87/143 (60.84%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF DYPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA Y+ ++A+HD++A +WT R+A Sbjct: 58 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E2_HUMAN (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.192e-50 Identity = 87/143 (60.84%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF DYPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA Y+ ++A+HD++A +WT R+A Sbjct: 58 KRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 200
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49 Identity = 87/143 (60.84%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+AE+ +DPP +CSAGPKGDNLY WV+TI+GP G+ Y+GG+FFLDI F +YPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA YL+++ +HD++A WT R+A Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49 Identity = 85/143 (59.44%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+A++ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF +YPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA Y+ ++A+HD++A +WT R+A Sbjct: 50 KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.069e-49 Identity = 85/143 (59.44%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+A++ +DPP +CSAGPKGDN+Y W +TI+GP G+ Y+GG+FFLDITF +YPFKPPKV F TRIYHCN++S G + LDILKD+WSPALTI+KVLL++ S+ T+ + +P+V IA Y+ ++A+HD++A +WT R+A Sbjct: 50 KRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYA 192
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 7.862e-49 Identity = 86/143 (60.14%), Postives = 115/143 (80.42%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI RE+A+L DPP CSAGP GD+L++W ATI+GPA +PY GG+FFL I FPTDYPFKPPKV F TRIYH N++S G++ LDIL+D WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+++++ A EWT ++A Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYA 146 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |