CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 46/133 (34.59%), Postives = 77/133 (57.89%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 +R+ R+ L D P S P DN+ W A I GP TP++ G F L +TF YP KPP V F+++++H N+ + G + LDIL++ WSP + +L +V+S+ +P+ +P A L+ E+ ++++ Sbjct: 7 RRLIRDFKRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYER 139
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.001e-19 Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD-------------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLR 541 +++++A++ P SAG DN +Y W +IGP T Y+GG F + FP DYP KPPK+ F++ I+H N+D GNV + IL D W P T+ +LL+V SM T+P+ +P A + E+ A+ + A+ R Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRR 160
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 45/137 (32.85%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 529 +R+ R+ L DPP S P +N+ W A I GP + ++G F L + F +YP P V FL++++H NV + G++ LDIL++ WSP I +L +++S+ +P+ ++P A L+ E+K ++++ E Sbjct: 7 RRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKE 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.478e-19 Identity = 51/141 (36.17%), Postives = 79/141 (56.03%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAK-HDQLAAEWT 535 R+ +E L + +D P+ ++ LY WVA I GP TPY+ G F LDI+ PT+YP +PP + F+T+I+H N+ G + LD+LK SWS T+ V ++ ++ + P +P+ +L K HD LA +T Sbjct: 4 RLMKEYKVLQNEEFEDILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRNGDVKGHDSLARMYT 144
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18 Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPA-GTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 RI +E L +P A P N + I G + +P++GG F ++ +YP PKV F+T+IYH NVD ++LDILKD WSPAL I VLL+++++ P+ +P+ + + ++A+ + A WT +A Sbjct: 7 RIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDKWSPALQIRTVLLSIQALLNAPNPDDPLANDVVEQWKTNEAQAIETARAWTRLYA 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.221e-18 Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCS-------AGPKGD-NLYNWV-ATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 R+Q+E+ L DPP S A GD + ++ + A I GP T Y GIF L I P YPF+PP V+F T IYH N+D++G + LDIL K +W P+L I+ VL ++R + + P+ + ++ ++ Y ++ D A E T ++AK Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAK 165
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.207e-18 Identity = 48/117 (41.03%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 K +QRE DP D N++ W A I GP+ TPY+GG+F L + P YP +PP+V FLT+I+H NV G + LDILK++WSPA T+ V A+ ++ +P +P+ Sbjct: 13 KEVQREKVA---DP--DIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.373e-18 Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 K++ RE+ L DPP+ +++ + A+I GP GTPY+GGIF + + D+P PPK FLT+I+H NV G + ++ LK W P L I +VLL V+ + P+ + + L LE + + A +T AK Sbjct: 17 KQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHAK 160
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.088e-17 Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 +++ +E++ L DPP+ P +++ + +I GP GTPY GGIF + + D+P PPK FLT+I+H NV S G + +++LK W L I VLL ++ + +P+ + + L LE+ Sbjct: 14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 + +E+ L DPP P ++L + TI GP GTPY GG+F + + D+P PPK FLT+I+H NV + G + +++LK W+ L I VLL ++ + +P+ + + L LE+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |