CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 45/137 (32.85%), Postives = 75/137 (54.74%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLE---DKAKHDQL 520 KR+ +E+ ELN + + P +++ N A + GPAGTPY+GG F + +D+P PPK F+T+I+H NV G + ++ LK W+ L + +LL ++ + P+ + + + L LE D KH +L Sbjct: 12 KRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKL 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 + +E+ L DPP P ++L + TI GP GTPY GG+F + + D+P PPK FLT+I+H NV + G + +++LK W+ L I VLL ++ + +P+ + + L LE+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 NL W I+ P PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 NL W I+ P PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 NL W I+ P PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.727e-17 Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 NL W I+ P PY G F ++I FP +YPFKPPK+ F T+IYH N+D G V L ++ ++W PA +V+ ++ ++ +P +P+ +A Y +D+ K + A E+T ++ + Sbjct: 31 NLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGE 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.562e-17 Identity = 46/128 (35.94%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHN 460 KR+ +E+ +L D P AGPK +N ++ W I GP TPY G+F + FP DYP PPK+ F I H N+ G V + IL ++ WSP ++ K+LL+V SM + P++ + Sbjct: 7 KRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIES 134
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.562e-17 Identity = 42/127 (33.07%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 +R+ +E++ L DPP+ P +++ + I GP GTPY GG+F + + D+P PPK FLT+I+H NV + G + +++LK W L I VLL ++ + +P+ + + L LE+ Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 42/127 (33.07%), Postives = 71/127 (55.91%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 +++ +E++ L DPP+ P +++ + I GP GTPY GGIF + + D+P PPK FLT+I+H NV + G + +++LK W L I VLL ++ + +P+ + + L LE+ Sbjct: 14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 + +E+ L DPP P ++L + TI GP GTPY GG+F + + D+P PPK FLT+I+H NV G + +++LK W+ L I VLL ++ + +P+ + + L LE+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |