CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 + +E+ L DPP P ++L + TI GP GTPY GG+F + + D+P PPK FLT+I+H NV G + +++LK W+ L I VLL ++ + +P+ + + L LE+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = 2 Query: 122 RIQREMAE-LNMDPPQDCSAGPK--GDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQL---AAEWTLRFA 547 RI+RE E + + CS + D+ I GP TPY+GG F L+I P YPF PPKV F+TRI+H N+ S G + LDILKD+W+ A+T+ VLL+++++ +P +A+ + K K+D A WT +A Sbjct: 8 RIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQF---KDKYDLFLLTAKHWTNAYA 153
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17 Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 + +E+ L DPP P ++L + TI GP GTPY GG+F + + D+P PPK FLT+I+H NV G + +++LK W+ L I VLL ++ + +P+ + + L LE+ Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLEN 140
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17 Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 185 KGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVA---------------FLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 K +NL + I GP GTPY GG F + + P YPF+PPKV F+TRI+H N+ S G + LDILKD W+ +LT+ VLL++++M +P +P +A ++ + A WT FA Sbjct: 46 KENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 218 IIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 I GP TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 218 IIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 I GP TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 7.935e-17 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2 Query: 218 IIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 I GP TPY+GG + L+I P YPF PPKV F+T+I+H N+ S G + LDILKD W+ A+T+ VLL+++++ +P +A+ Y ++ Q A W +A Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYA 153
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 NL NW I G GTP++GG+F L + F DYP PPK F ++H NV +G V L IL++ W PA+TI ++LL ++ + P++ +P +Y +++ ++++ +FA Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 NL NW I G GTP++GG+F L + F DYP PPK F ++H NV +G V L IL++ W PA+TI ++LL ++ + P++ +P +Y +++ ++++ +FA Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16 Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 NL NW I G GTP++GG+F L + F DYP PPK F ++H NV +G V L IL++ W PA+TI ++LL ++ + P++ +P +Y +++ ++++ +FA Sbjct: 37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |