CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15 Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 2 Query: 134 EMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHD 514 E L +P + +NL W + GP+ T Y+GG+F ITFP +YP++PPK+ F + ++H N+ G + + IL +WSPA I VLL+V S+F P+ +P A Y + K D Sbjct: 9 EYRNLTENPSEHFKVSVNENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKED 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.700e-15 Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKDSWSPALTITKV---LLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KR + +M +L M D D+L + T GP + YQGG++ + + P YP+K P V F+ +IYH NVD S+G V LD++ +WSP + V L ++ NPS +P A L + D+A ++ E+ ++AK Sbjct: 6 KRREMDMMKLMMS---DYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPS--DPFNGEAASLLMRDRAAYELKVKEYCEKYAK 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.655e-14 Identity = 47/148 (31.76%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKV---LLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KR + +M +L M D D + + GP + YQGG++ + + P YP+K P V F+T+IYH NVD +G+V LD++ +WSP + V L ++ NPS +P+ A L + D+ ++Q E+ ++AK Sbjct: 6 KRREMDMMKLMMS---DYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPS--DPLNGEAAALMMRDRPAYEQRVKEYCEKYAK 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.161e-14 Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGD-NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHNP 463 +Q+++ +L P SAG + N++ W TIIGP T Y+GG F +TFP +YP PP V F + ++H NV S G V + IL + W+P T+ ++L++ SM + P+ +P Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESP 135
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.161e-14 Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGD-NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-------------KDSWSPALTITKVLLAVRSMFTNPSLHNP 463 +Q+++ +L P SAG + N++ W TIIGP T Y+GG F+ ++FP +YP PP V F + I+H NV G V + IL + W+P T+ ++L++ SM + P+ +P Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESP 135
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.161e-14 Identity = 39/121 (32.23%), Postives = 71/121 (58.68%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAH 484 R+Q++++EL++ P + P +++ N+ T+ G YQGG F ++P +PPKV L ++YH N+D GNV L+IL++ W P L++ V++ ++ +F P+ +P+ AH Sbjct: 28 RVQKDLSELSL-PSTMKTHFPSAEDIMNFELTVRPDEGF-YQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAH 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.814e-14 Identity = 41/116 (35.34%), Postives = 69/116 (59.48%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAG-PKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 RIQ+++ ELN+ P C+ P ++L N+ II P Y+ G F + ++YP +PPKV T++YH N+D GNV L+IL++ W+P L I ++ ++ +F P+ +P+ Sbjct: 30 RIQKDINELNL--PNTCATDFPDPNDLLNF-KLIISPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPL 142
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.287e-14 Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRI-YHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTN 445 R+Q+E++E ++PP DNL WV + G GT Y + L + FP YP + P+V F+ H ++ S G++ LDIL DSWSPA+T++ V +++ SM ++ Sbjct: 19 RLQKELSEWQVNPPTGFKHRVT-DNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSS 126
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14 Identity = 42/138 (30.43%), Postives = 67/138 (48.55%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHD 514 + E L +P ++ +N+ W + GPA T Y+GG+F I FP +YP++PP++ F + ++H N+ S G V + IL +WSP I +LL+V S+ P+ +P A Y K D Sbjct: 6 LMAEYRHLTENPSENFKVSVNENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKED 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14 Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKV---LLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KR + ++ +L M D D + + GP + Y+GG++ + + P YP+K P V F+T+IYH NVD +G+V LD++ +WSP + V L ++ NPS +P+ A L + D+ ++Q E+ ++AK Sbjct: 6 KRREMDLMKLMMS---DYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPS--DPLNGEAAALMMRDRPTYEQRVKEYCEKYAK 148 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |