CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13 Identity = 38/145 (26.21%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKDSWSPALTITKVL-LAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 +RI+ ++ +L M D D++ + +GP TPY+ G++ L + P +YP+K P + F+ +I+H N+D ++G++ LD++ +WSP + ++ + + P+ +P+ A L L DK +++ E+ ++A Sbjct: 6 RRIETDVMKLLMS---DHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_XENTR (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis GN=ube2m PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13 Identity = 44/133 (33.08%), Postives = 69/133 (51.88%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAG-PKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 RIQ+++ ELN+ P+ C D+L N+ I G Y+GG F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 33 RIQKDINELNL--PKTCEIEFSDHDDLLNFKLVICPDEGF-YKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: U2D2L_HUMAN (Putative ubiquitin-conjugating enzyme E2 D2-like protein OS=Homo sapiens GN=UBE2DNL PE=5 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13 Identity = 37/72 (51.39%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYH 334 K I +E EL DP CSAGP D++ +W ATI P + Y GG+FFL FP+DY FKPPK+ F IYH Sbjct: 4 KLIHKEFLELARDPQPHCSAGPVWDDMLHWQATITRPNDSSYLGGVFFL--KFPSDYLFKPPKIKFTNGIYH 73
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13 Identity = 32/120 (26.67%), Postives = 71/120 (59.17%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDS--WSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 NL+NW I G T ++GG++ + + F D+P PPK F ++H NV +G V L +L ++ W P+++I ++L+ ++ + +P++ +P +Y +++A++++ + +++A Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 36/119 (30.25%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 197 LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSA-GNVNLDILKDSWSPALTITKVLLA-VRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 L +V GP GTPY+GG++ + + P YPFK P + F+ +I+H N+D A G V LD++ +W+ +T + + + + P+ +P+ A +YL ++ Q E+ ++A Sbjct: 31 LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 36/119 (30.25%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 197 LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSA-GNVNLDILKDSWSPALTITKVLLA-VRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 L +V GP GTPY+GG++ + + P YPFK P + F+ +I+H N+D A G V LD++ +W+ +T + + + + P+ +P+ A +YL ++ Q E+ ++A Sbjct: 31 LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 36/119 (30.25%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 197 LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSA-GNVNLDILKDSWSPALTITKVLLA-VRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 L +V GP GTPY+GG++ + + P YPFK P + F+ +I+H N+D A G V LD++ +W+ +T + + + + P+ +P+ A +YL ++ Q E+ ++A Sbjct: 31 LNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYA 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 RIQ+++ ELN+ D S D+L N+ I G Y+ G F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 33 RIQKDINELNLPKTCDISFSDP-DDLLNFKLVICPDEGF-YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 RIQ+++ ELN+ D S D+L N+ I G Y+ G F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 33 RIQKDINELNLPKTCDISFSDP-DDLLNFKLVICPDEGF-YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.075e-13 Identity = 43/132 (32.58%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 RIQ+++ ELN+ D S D+L N+ I G Y+ G F YP PPKV T +YH N+D GNV L+IL++ W P LTI ++ ++ +F P+ +P+ A + ++ +Q Sbjct: 33 RIQKDINELNLPKTCDISFSDP-DDLLNFKLVICPDEGF-YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQ 162 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |