CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 40/145 (27.59%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSPALTITKVL-LAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 +RI+ ++ +L M D DN+ + GP+ TPY GGI+ + + P++YP+K P + F+ RI+H N+D +G+V LD++ +WSP + + + + + P+ +P+ A L L + + ++ R+A Sbjct: 6 RRIETDVMKLLMS---DYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTYYAKVRDYIARYA 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDK 502 R Q+++ E M+ P C+ K N I P YQ F I P+ YP+ PPKV T +YH N+D G+V L+IL+ W P L I V+ + ++F P+ +P+ A L +++K Sbjct: 81 RAQKDIDE--MEVPTGCAVSFKDTNDILNFNLSITPTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNK 205
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAG-PKG-DNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 R+ ++++ELN+ P CS P G D+L N+ +I P Y G F YP + PKV T++YH N+D GNV L+IL++ W P L I V+ + +FT P+ +P+ Sbjct: 34 RLHKDISELNL--PSSCSISFPNGKDDLMNFEVSI-KPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPL 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 42/133 (31.58%), Postives = 71/133 (53.38%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQL 520 R+Q+++ EL + P + ++ + II P Y+GG F TF YP PPKV +I+H N+D G + L+IL++ WSPAL + ++L + S+F P+ ++P+ A + +DK + L Sbjct: 36 RLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNL 168
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 45/144 (31.25%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 119 KRIQREMAELNMD-PPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILK-DSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRF 544 KR+ +E+ +L+ + PP N+ W ++ P PY+ F L I FP +YP KPP + F T+IYH N+ G V L ++ ++W P +VL A+ + + P+L P+ +A L +D + A E+TL++ Sbjct: 5 KRVAKELDDLSKELPPYLRHLSSDDANVLVWHMLLL-PDQLPYRLKAFGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTENWKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQY 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 45/148 (30.41%), Postives = 76/148 (51.35%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDS-AGNVNLDILKDSWSP---ALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KR + ++ +L M D D ++ + GP + YQGG++ + + YP+K P + F +IYH NVD +G+V LD++ +WSP + I +V L ++ NPS +P+ A L + DK ++ E+ R+AK Sbjct: 6 KRREMDLMKLMMS---DYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPS--DPLNGEAASLMMRDKNAYENKVKEYCERYAK 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB12L_ARATH (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana GN=RCE2 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAG-PKGDN-LYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 R+ ++++ELN+ P+ C P G N L N+ TI G Y G F YP + PKV T++YH N+D GNV L+IL++ W P L I V+ + +FT P+ +P+ Sbjct: 35 RLHKDISELNL--PKSCKISFPNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPL 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLED 499 R+++++A L + P + K N V I P Y+GG F + F YP +PP V L IYH N+D +GN+ L++L++ WSP + + V+L + +F P+ +P+ A L D Sbjct: 34 RVEKDLATLEL--PTTVTLDTKCLGSENKVYLRISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRD 157
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 RIQ+++ +L + P S N + I P Y+GG F I +YP PPKV L +IYH N+D GNV L+IL+ W+P L + +L+ ++ +F +P+ +P+ Sbjct: 27 RIQKDVTDLEI--PSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPL 139
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2F_XENTR (NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis GN=ube2f PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 131 REMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD------SWSPALTITKVLLAVRSMFTN-PSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 +E+AEL + P C N ++ + P + YQGG F +I P Y PPKV LTRI+H N+ G + L +L++ W+P T+ V+ + S+FT+ + +P+ A +L DK ++ ++ R+A+ Sbjct: 39 KEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYAR 185 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |