CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2F_XENLA (NEDD8-conjugating enzyme UBE2F OS=Xenopus laevis GN=ube2f PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 43/147 (29.25%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 131 REMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD------SWSPALTITKVLLAVRSMFTN-PSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 +E+AEL + P C N ++ + P + YQGG F +I P Y PPKV LTRI+H N+ G + L +L++ W+P T+ V+ + S+FT+ + +P+ A +L DK ++ ++ R+A+ Sbjct: 39 KEVAELEANLPCTCKVNFPDPNKLHYFHLTVSPDESYYQGGRFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKDEYRNKVEDYIKRYAR 185
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 40/135 (29.63%), Postives = 65/135 (48.15%), Query Frame = 2 Query: 134 EMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHD 514 E L +P ++ +N+ W + GP T Y+GG+F + FP +YP+ PPK+ F + ++H N+ G + + IL +WSPA I +LL+V S+ P+ +P A Y + K D Sbjct: 9 EYRHLIENPSENFKISVNENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKED 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRI-YHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRF 544 R+Q+E E +PP DNL W+ + G GT Y + L + FP YP + P+V F H ++ S G++ LD+L DSWSPA+ ++ + L++ SM ++ S+ P YL++ KH + E RF Sbjct: 19 RLQKEFMEWQTNPPSGFKHRVS-DNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQK--PKDNDHYLKN-CKHGRSPKETRWRF 156
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 46/144 (31.94%), Postives = 74/144 (51.39%), Query Frame = 2 Query: 119 KRIQREMAELNMD-PPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL-KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRF 544 KR+ +E+ L+ + PP N+ W ++ P PY F + I FP +YPFKPP + F T+IYH NV G V L ++ ++W P +VL A+ + + P+L P+ +A L ++ + A E+TL+F Sbjct: 5 KRVAKELESLSKELPPYLRQLSSDDANVLVWHMLLL-PDQLPYGLKAFQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNENWKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEEFTLKF 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_DEBHA (Ubiquitin-conjugating enzyme E2 6 OS=Debaryomyces hansenii GN=UBC6 PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.450e-12 Identity = 35/110 (31.82%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLT--RIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFT 442 KR+ +E + ++PP SA P +N+ W I GP TP++ G + + FP++YPFKPP ++ +T + CN +++ D D+W+PA ++ +L + S T Sbjct: 8 KRLTKEYKAITLNPPPYVSAKPNDENILEWHYVITGPPHTPFEEGQYHGILRFPSEYPFKPPSISMITPNGRFACNTRLCLSMS-DYHPDTWNPAWSVATILTGLLSFMT 116
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.506e-12 Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNL-DILKDSWSPALTITKVLLAVRSMFTN 445 KR+ +E + +PP A P DN+ W I GPA TPY+GG + +TFP+DYP+KPP + +T ++ +++ D D+W+P +++ +L + S T+ Sbjct: 8 KRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTS 117
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 47/152 (30.92%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAG-PKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD------SWSPALTITKVLLAVRSMFTN-PSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 K + +E+AEL + P C P + L+ + T+I G YQGG F +I P Y PPKV LTRI+H N+ G + L +L++ W+P T+ V+ + S+FT+ + +P+ A +L DK ++ R+A+ Sbjct: 35 KLLVKEVAELEANLPCTCKVNFPDPNKLHYFQLTVIPDEGY-YQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYAR 185
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 30/91 (32.97%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 242 YQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHD 514 Y GG ++ ++ YP +PP V + RIYH N+D GNV L++L++ W+PAL I +++ + +F P+ +P+ A +ED + + Sbjct: 72 YAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFE 162
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 39/130 (30.00%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDIL--KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKA 505 + R+ +L + + +A P +++ W I G + +QG +F L I F ++Y + PP V F+T +H NVD G +D L + W+ T++ +LLA++ M +NP L NP+ A + ++D++ Sbjct: 9 LHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDES 138
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 40/130 (30.77%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVD-SAGNVNLDILKD--SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKA 505 +QR+ +L + + +A P +++ W I G + +QG +F L I F ++Y + PP V F+T +H NVD G +D L + W+ T++ +LLA++ M +NP L NP+ A + +D++ Sbjct: 9 LQRDFYDLKENNYKGITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDES 138 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |