CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKG--DNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIY--HCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTN 445 KR+Q+E+ L DPP + K +++ W+ + G GT Y+G F L F + YPF P+V F H +V S G++ L IL + WSPAL++ V L++ SM ++ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSS 118
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKG--DNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIY--HCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTN 445 KR+Q+E+ L DPP + K +++ W+ + G GT Y+G F L F + YPF P+V F H +V S G++ L IL + WSPAL++ V L++ SM ++ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSS 118
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 38/138 (27.54%), Postives = 66/138 (47.83%), Query Frame = 2 Query: 125 IQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD--------SWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHD 514 + E L +P ++ +++ W + GP T Y+GG+F + FP +YP+ PP++ F + ++H N+ G + + IL +WSPA I +LL+V S+ P+ +P A Y + K D Sbjct: 6 LMAEYRHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKED 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 44/151 (29.14%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKD------SWSPALTITKVLLAVRSMFTN-PSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 K + E+AEL + P C N + + P YQGG F +I P Y PPKV LT+I+H N+ G + L +L++ W+P T+ V+ + S+FT+ + ++P+ A +L+DK E+ R+A+ Sbjct: 35 KLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYAR 185
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_DANRE (Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHN 460 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +I+ VL++++S+ T HN Sbjct: 75 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLITTGHNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHN 196
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 182 PKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLT----------------------RIYHCNVD-SAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHL 487 P D L+ W A I GP +P++ ++ L+I PT+YP PPK+ F+ ++ H NV+ G + LDIL+ WSPA T+ L+A+ + NP +P+ +A+L Sbjct: 36 PLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANL 160
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENTR (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGI-AHLYLEDKAKHDQLAAEWTLRFA 547 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +++ VL++++S+ T HN PG + D +++ T+R A Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNE--PGFEQERHSGDSKNYNECIRHETIRVA 211
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_XENLA (Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 46/152 (30.26%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGI-AHLYLEDKAKHDQLAAEWTLRFA 547 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +++ VL++++S+ T HN PG + D +++ T+R A Sbjct: 62 RIKRDIMSIYKEPPPGMFVVPDPHDMTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSLSSVLISIQSLMTENPYHNE--PGFEQERHSGDSKNYNECIRHETIRVA 211
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_RAT (Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus GN=Ube2z PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHN 460 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +I+ VL++++S+ T HN Sbjct: 105 RIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHN 226
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_MOUSE (Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus GN=Ube2z PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHN 460 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +I+ VL++++S+ T HN Sbjct: 105 RIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHN 226 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |