CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2Z_HUMAN (Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 41/122 (33.61%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTR-----IYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHN 460 RI+R++ + +PP P ++ A I GP TPY+GG F P DYP PP+V +T ++ N G V L IL +WSPA +I+ VL++++S+ T HN Sbjct: 103 RIKRDIMSIYKEPPPGMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPRVKLMTTGNNTVRFNPNFYRNGKVCLSILGTWTGPAWSPAQSISSVLISIQSLMTENPYHN 224
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.920e-11 Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNL-DILKDSWSPALTITKVLLAVRSMFT 442 KR+ +E + +PP A PK DN+ W I GP TPY+ G + + FP DYPF PP + LT ++ +++ D D+W+P+ ++ +L + S T Sbjct: 8 KRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTPNGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMT 116
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNL-DILKDSWSPALTITKVLLAVRSMFT 442 KR+ +E + +PP A P DN+ W I GP TPY+ G + +TFP+DYPF PP + +T ++ +++ D ++W+PA ++ +L + S T Sbjct: 8 KRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITPNGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 41/136 (30.15%), Postives = 67/136 (49.26%), Query Frame = 2 Query: 122 RIQREMAELNMDPP-----------QDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLE 496 R++R++ L++ P D S PK + I+ P Y G ++ F YP +PPKV L +I+H N+D GNV L+IL++ WSPAL + ++ + +F P+ ++P+ A L E Sbjct: 31 RLKRDLDSLDLPPTVTLNVITSPDSADRSQSPK-------LEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCE 159
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 2 Query: 194 NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNV------------NLDILKDSWSPALTITKVLLAVRSMFTNPSLHNP 463 N++ W TIIGP T Y GG F ++FP +YP PP V F + ++H NV G V ++ + W+P T+ ++L++ SM ++P+ +P Sbjct: 36 NVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESP 137
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 34/113 (30.09%), Postives = 58/113 (51.33%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNL-DILKDSWSPALTITKVLLAVRSMFTNPSL 454 KR+ +E L +P + A P +N+ W I GP TPY+GG + + FP DYPFKPP + +T ++ ++ D SW+P+ ++ +L+ + S T+ + Sbjct: 8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITPSGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMTSDEI 120
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2W_DANRE (Probable ubiquitin-conjugating enzyme E2 W OS=Danio rerio GN=ube2w PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKG--DNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIY--HCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTN 445 KR+Q+E+ L DPP + + + + W + G GT Y+G F L F + YPF+ P+V F H +V S G++ L IL + WSPAL++ V L++ SM ++ Sbjct: 6 KRLQKELLALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLSS 118
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.497e-11 Identity = 34/109 (31.19%), Postives = 57/109 (52.29%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNL-DILKDSWSPALTITKVLLAVRSMFT 442 KR+ +E + +PP A P +N+ W I GP TPY GG + +TFP+DYP+KPP + +T ++ +++ D D+W+P ++ +L + S T Sbjct: 8 KRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITPNGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |