CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.652e-46 Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRIQ+E+++L DPP CSAGP GD+L++W ATI+GP + YQGG+FFL + FPTDYPFKPPK+AF T+IYH N++S G++ LDIL+ WSPALT++KVLL++ S+ +P+ +P+VP IA +Y DK K+++ A EWT ++A Sbjct: 4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 6.229e-46 Identity = 81/143 (56.64%), Postives = 113/143 (79.02%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP GD++++W ATI+GP +PYQGG+FFL I FPTDYPFKPPKVAF TRIYH N++S G++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++++ EWT ++A Sbjct: 4 KRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UB2D3_BOVIN (Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.812e-45 Identity = 80/143 (55.94%), Postives = 113/143 (79.02%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+++L DPP CSAGP GD++++W ATI+GP +PYQGG+FFL I FPTDYPFKPPKVAF TRIYH N++S ++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++++ EWT ++A Sbjct: 4 KRINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.367e-45 Identity = 78/143 (54.55%), Postives = 111/143 (77.62%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 +RI +E+ EL DPP CSAGP G+++++W ATI+GP +PY GG+F ++I FP DYPFKPPKV F T+++H N++S GN+ LDILKD WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y DK K++ +A WT ++A Sbjct: 4 RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.038e-45 Identity = 77/143 (53.85%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP GD+++ W ATI+GPA +P+ GG+F + I FP DYPFKPPKVAF T++YH N++S G++ LDILK+ WSPALT++KVLL++ S+ T+P+ +P+VP IAH+Y D+ K++ A WT ++A Sbjct: 4 KRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44 Identity = 80/143 (55.94%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP G+++++W ATI+GP +PYQGG FFL I FPT+YPFKPPKV F TRIYH NV+S G++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++ A EWT ++A Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44 Identity = 80/143 (55.94%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP G+++++W ATI+GP +PYQGG FFL I FPT+YPFKPPKV F TRIYH NV+S G++ LDIL+ WSPALTI+KVLL++ S+ +P+ +P+VP IA +Y D+ K+++ A EWT ++A Sbjct: 4 KRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.617e-44 Identity = 77/143 (53.85%), Postives = 111/143 (77.62%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP +++++W ATI+GPA +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.617e-44 Identity = 77/143 (53.85%), Postives = 111/143 (77.62%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP +++++W ATI+GP+ +PY GG+F + I FP DYPFKPPKVAF T+++H NV+S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44 Identity = 76/143 (53.15%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP +++++W ATI+GP +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D+AK++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 146 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |