CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 75/143 (52.45%), Postives = 111/143 (77.62%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP +CSAGP +++++W ATI+GP +PY GG+F + I FP DYPFKPPKV+F T++YH N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y D++K++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 76/143 (53.15%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP +++++W ATI+GP+ +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y DK K++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43 Identity = 76/143 (53.15%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI +E+ +L DPP CSAGP +++++W ATI+GP+ +PY GG+F + I FP DYPFKPPKVAF T+++H N++S G++ LDILK+ WSPALTI+KVLL++ S+ T+P+ +P+VP IAH+Y DK K++ A WT ++A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.033e-41 Identity = 74/144 (51.39%), Postives = 109/144 (75.69%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGD-NLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 KRI RE+ ++ PP +CSAGP + ++++W ATI+GP +PY GG+F + I F +DYPFKPPKV F T++YH N+DS G++ LDILK+ WSPA T +KVLL++ S+ T+P+ ++P+VP IAHLY DK+K++ A +WT ++A Sbjct: 4 KRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKYA 147
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.660e-31 Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 2 Query: 173 SAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 S G +N+Y W A I GP GTPY+GG+F L I FPTDYPFKPPK F T IYH N++ G++ ++ILKD W+PAL + KVLL++ + P+ +P+VP I L+ ++ + DQ A E+T R A Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.919e-29 Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KR+Q+E+ ++ PP CSA DNL W AT+ GP G+P++ G+F +DI P DYPFKPP + F T+IYH N+ ++ + +WSP L I VL +RS+ T+P+ NP+ IA + D+ ++ A EWT ++AK Sbjct: 5 KRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK 148
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.704e-27 Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 KRI +E +L DP +A P DNL + TI GP +PY+ GIF L++ P DYP + PKV FLT+IYH N+D G + LD+LK +WSPAL I VLL+++++ +P+ ++P+ +A +++++ A EWT +AK Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAK 149
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.907e-27 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 +RI +E L +P SA P DN+ + I+GP +PY+GG+F L++ P +YP PKV FLT+IYH N+D G + LDILKD WSPAL I VLL+++++ + P+ +P+ IA + ++A+ A EWT +A Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYA 150
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.959e-27 Identity = 58/143 (40.56%), Postives = 89/143 (62.24%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFA 547 +RI +E L +P SA P +N+ + I+GP +PY+GG+F L++ P +YP PKV FLT+IYH N+D G + LDILKD WSPAL I VLL+++++ + P+ +P+ IA + ++A+ + A EWT +A Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 150
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.351e-26 Identity = 54/124 (43.55%), Postives = 78/124 (62.90%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 490 KR+Q E+ L M P SA P GDN++NW+ TI G T Y+ F + + FPTDYP+KPP V F T+ +H NVD+ GN+ LDILKD WSP + +L++++S+ P+ +P+ A L+ Sbjct: 9 KRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW 132 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |