CX676379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.326e-23 Identity = 47/131 (35.88%), Postives = 82/131 (62.60%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKH 511 +R+ R+ + D P SA P DN+ +W A IIGPA TP++ G F L + F YP KPP V F++ ++H NV ++G + LDIL++ WSP ++ +L +++S+ +P++ +P A+LY + ++++ Sbjct: 7 RRLMRDFKRMQQDAPSGVSASPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQY 137
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 52/147 (35.37%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 122 RIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDIL----KDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEWTLRFAK 550 R++RE++ L +PP + GD + + A I+G A TPY+ G+F L++ P YPF+PP++ FLT IYH N+DSAG + LD+L K +W P+L I +L ++ + P+ +P++ I+ + +K + A +WT + A+ Sbjct: 6 RLKRELSLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNARQWTEKHAR 152
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 53/138 (38.41%), Postives = 80/138 (57.97%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAEW 532 KR+Q+E+ L M + SA P+ DNL+ W+ TI G GT Y+ + L + FP+ YP+ P V F+T +H NVDS GN+ LDILKD WS + +LL+++S+ P+ +P+ P A L+ A L ++ Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELWQNQTAYKKHLHEQY 170
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 50/137 (36.50%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 529 KR+ + L DPP S P+ +N+ +W A I GP TP+ GG F L + F DYP KPP V F++R++H N+ + G++ LDIL++ WSP + VL +++S+ +P+ +P A L+ E+K ++++ E Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKREYNRKVIE 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKH 511 KR+ R+ L+ DPP S P DNL W A I GPA TP++ G F L +TF YP KPP V FL++++H NV + G + LDIL++ WSP + +L +++S+ +P+ ++P A LY E+ ++ Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEY 137
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 49/137 (35.77%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQLAAE 529 +R+ R+ + DPP SA P DN+ W A IIGPA TP++ G F L + F YP KPP+V F++ ++H NV + G + LDIL++ WSP + VL +++S+ +P+ +P ++LY +++ ++ + E Sbjct: 7 RRLMRDFKRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRE 143
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.673e-23 Identity = 47/133 (35.34%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 +R+ R+ +L DPP S P DN+ W A I GP TP++ G F L + F +YP KPP V F+++++H NV + G++ LDIL++ WSP + +L +++S+ P+ ++P A LY E++ ++++ Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEK 139
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23 Identity = 52/124 (41.94%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLY 490 KR+Q+E+ L + SA P+ DNL+ WV TI G AGT Y+ + L + FP+ YP+ P V FLT YH NVD+ GN+ LDILKD WS + +LL+++S+ P++ +P+ A L+ Sbjct: 33 KRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW 156
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.410e-23 Identity = 47/133 (35.34%), Postives = 82/133 (61.65%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPIVPGIAHLYLEDKAKHDQ 517 +R+ R+ L DPP S P +N+ W A I GP TP++ G F L I F +YP KPP V F+++++H NV + G + LDIL++ WSP ++ +L +++S+ ++P+ ++P A LY E++ ++++ Sbjct: 7 RRLMRDFKRLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEK 139
BLAST of CX676379 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.677e-23 Identity = 49/116 (42.24%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 119 KRIQREMAELNMDPPQDCSAGPKGDNLYNWVATIIGPAGTPYQGGIFFLDITFPTDYPFKPPKVAFLTRIYHCNVDSAGNVNLDILKDSWSPALTITKVLLAVRSMFTNPSLHNPI 466 KR+Q+E+ L M +A P GDNL+ WVAT+ GP T Y+ + L + FP+DYP+KPP V F T +H NVD +GN+ LDILK++W+ + + +LL+++S+ P+ +P+ Sbjct: 33 KRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPL 148 The following BLAST results are available for this feature:
BLAST of CX676379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676379 ID=CX676379; Name=CX676379; organism=Citrus sinensis; type=EST; length=823bpback to top |