CN182100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.089e-60 Identity = 112/143 (78.32%), Postives = 126/143 (88.11%), Query Frame = -1 Query: 356 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAYYYQAPP 784 D+ L YLESFYTLRKPVASTINTLAGALY+VF ASPD+AR+EMR ACFDYLSLGGI S GP++LLSGLNPRP+ L HFFAVAIYGVGR+L+PFPSP R W+GAR+I ASGIIFPI+K+EGLRQMFFPA VPA YY+APP Sbjct: 396 DSSTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPA-YYRAPP 537
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.616e-32 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = -1 Query: 374 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 784 +A + ++SFY +RKP+++T+NTL A QV AS DEA++ MRQ C+DYLS GG +SG ++LL G+NPRP+ L++H A+ + +G +L PFPSP R W R+ A ++ P +KAEG+ QM FP AY Sbjct: 370 NAQKISQVIKSFYDIRKPMSATVNTLGNAFSQVLVASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAAY 506
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.047e-31 Identity = 61/137 (44.53%), Postives = 92/137 (67.15%), Query Frame = -1 Query: 374 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 784 D + ++SFY LRKP+++T+NTL + +QV AS DEA++ MRQ CFDYLS GG +SG ++L+ G+NPRPL L +H F +++ +G++L PFP+P R W R++ + ++ P +KAEG+ QM P AY Sbjct: 372 DENKVSEVMKSFYALRKPMSATVNTLGNSFWQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSPTNAAAY 508
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.333e-31 Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = -1 Query: 371 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAYY 784 DA + + SFY +RKP+++T+NTL A QV S DEA++ MRQ +DYL GG +SG ++LL G+NPRPL LV+H A+ + +G++L PFPSP R W ++ A ++ P +KAEG+ QM FPA AY+ Sbjct: 371 DANKVSEVINSFYDIRKPMSATVNTLGNAFSQVLIGSTDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYH 508
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.118e-28 Identity = 62/137 (45.26%), Postives = 84/137 (61.31%), Query Frame = -1 Query: 374 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 784 DA + ++SFY +RKP+++T+NTL A QV AS DEA++ MRQ CFDYLS GG +SG ++LL G+NPRPL L+FH + + +G++L PFPSP W R + AEG+ QM PA AY Sbjct: 371 DANKVSEVIKSFYVIRKPMSATVNTLGNAFSQVLIASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLLSPFPSPLGIWHSLR-----------LFGAEGVSQMLSPAYAAAY 496
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.730e-26 Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 374 LGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFPSPYRFWIGARIITSASGIIFPIMKAEGLRQMFFPATVPAY 772 + + ++SFY +RKP+++T+NTLA QV A+ DEAR+ MRQ CF+YL+ G + G +++L G+NP PL LV H A+ + +G +L PFPSP RFW RI+ A ++ + EG ++M P AY Sbjct: 374 VSDLVKSFYIIRKPMSATVNTLASIFSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIPTNAAAY 506
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.168e-16 Identity = 53/127 (41.73%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 416 DAPALGNYLESFYTLRKPVAS-TINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 784 D A+ +SFY RK S +N LA ALY++FSA+ D++ ++R+ACF Y LGG +GPV LLS L+P PL L+ HFFAVAIY V P P + ++ A +IFP++ +E Sbjct: 443 DDAAIFEANKSFYWARKTSHSFVVNILAQALYELFSAT-DDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = -1 Query: 416 DAPALGNYLESFYTLRKPVAS-TINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 784 D A+ +SF+ RK S +N LA ALY++FSA+ D R ++R+ACF Y LGG +GPV LLS L+P PL+L+ HFF+VA+Y P P + I+ A IIFP++ +E Sbjct: 442 DDAAIFQAKKSFFWSRKRSHSFVVNVLAQALYELFSATDDSLR-QLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.344e-15 Identity = 50/127 (39.37%), Postives = 74/127 (58.27%), Query Frame = -1 Query: 416 DAPALGNYLESFYTLRKPVAS-TINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGVGRILLPFP---SPYRFWIGARIITSASGIIFPIMKAE 784 D A+ +SF+ RK S +N LA ALY++FSA+ D++ ++R+ACF Y LGG +GPV LLS L+P PL+L+ HFF+VAIY P P + ++ A I+FP++ +E Sbjct: 441 DDAAIFQAKKSFFWSRKRTHSFVVNVLAQALYELFSAT-DDSLHQLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566
BLAST of CN182100 vs. ExPASy Swiss-Prot
Match: ERG1_CANAL (Squalene monooxygenase OS=Candida albicans GN=ERG1 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.053e-11 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = -1 Query: 494 DAPALGNYLESFYTLRKPVASTINTLAGALYQVFSASPDEARKEMRQACFDYLSLGGIFSSGPVSLLSGLNPRPLILVFHFFAVAIYGV-----GRILLPFP 784 D + L++F+ RK + + INTL+ +LY +F+A R +R CF Y GG +GP+ LLSG+ P P++L HFF+VA Y V R LL FP Sbjct: 369 DHQLIAKRLKTFHRKRKNLDAVINTLSISLYSLFAADKKPLRI-LRNGCFKYFQRGGECVNGPIGLLSGMLPFPMLLFNHFFSVAFYSVYLNFIERGLLGFP 469 The following BLAST results are available for this feature:
BLAST of CN182100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182100 ID=CN182100; Name=CN182100; organism=Citrus sinensis; type=EST; length=784bpback to top |