CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_WHEAT (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum GN=ND1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.345e-31 Identity = 66/158 (41.77%), Postives = 104/158 (65.82%), Query Frame = 3 Query: 156 VLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 V A I +L + +GV +V ER++ A +Q+R GP+ G+LQ LADG KL+ KE + PS N LF + P + L+++ V+PF Y +VL+DLNIG+ AISS+ G++++G+ SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V Sbjct: 5 VPAEILCLILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_MAGSA (NADH-quinone oxidoreductase subunit H OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=nuoH PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.082e-30 Identity = 66/164 (40.24%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 V+ +L ++ I VL + I V + + ER++ +Q R GP P G+LQ +ADG KL KE +LP+ N +F P + L+++ VIPF VLAD+N+G+ AISS+ G++M+G+ SN+KY+FLGGLR+AAQ +SYE+ + ++S+ L V Sbjct: 13 VWRLLIIVLQIVAIVLPLLIAVAYLTYAERKVIGAMQLRKGPNVVGPFGLLQPMADGLKLFVKETVLPTSANRVVFVGAPMLTFFLALVAWAVIPFDKGWVLADINVGVLYLFAISSLGVYGIIMAGWASNSKYAFLGGLRSAAQMVSYEVSIGFILISVLLTV 176
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_ARATH (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana GN=ND1 PE=1 SV=4) HSP 1 Score: 134.035 bits (336), Expect = 1.082e-30 Identity = 65/162 (40.12%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 150 LWVLAPISIY--VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 +++ P I +L + +GV +V ER++ A +Q+R GP+ G+LQ LADG KL+ KE + PS N LF + P + L+++ V+PF Y +VL+DLNIG+ AISS+ G++++G+ SN+KY+FLG LR+AAQ +SYE+ + L ++++ + V Sbjct: 1 MYIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLICV 162
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_AZOSE (NADH-quinone oxidoreductase subunit H OS=Azoarcus sp. (strain EbN1) GN=nuoH PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.414e-30 Identity = 68/174 (39.08%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 120 LESLQEVYG----ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL---TLCVLSIS 620 LE + +++G +W L I + + + V + ER++ +Q RIGP P G+LQ +ADG KLLFKE ++P+ + LF +GP +A+ L ++ V+PF +VLAD+N G+ +AI+S+ G++++G+ SN+KY FLG +RAAAQ +SYE+ + +CVL IS Sbjct: 5 LEPVVQLFGPAWPAVWTLTKIVAIIAPLMLCVAYLTLAERKVIGYMQVRIGPNRVGPKGLLQPIADGMKLLFKEIIVPTGASKGLFILGPILAIAPSLAAWAVVPFGEGMVLADVNAGLLFLLAITSVEVYGVIIAGWASNSKYPFLGSMRAAAQMVSYEVAMGFALICVLLIS 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICTY (NADH-quinone oxidoreductase subunit H OS=Rickettsia typhi GN=nuoH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.411e-30 Identity = 65/165 (39.39%), Postives = 110/165 (66.67%), Query Frame = 3 Query: 141 YGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 Y ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I + L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 6 YEYMFPLTVIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNADKILFILAPIITFVLSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSIGLVIVTVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_DECAR (NADH-quinone oxidoreductase subunit H OS=Dechloromonas aromatica (strain RCB) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.411e-30 Identity = 64/160 (40.00%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL---TLCVLSIS 620 +W L I + V + +GV + + ER++ +Q RIGP P G++Q +ADG KLL KE ++PS N +F I P +A+ L ++ V+PF+ +LVLA+++ + +AI+S+ G+++SG+ SN+KY+FLG +R+AAQ +SYEI + +CVL +S Sbjct: 19 VWTLIKIVLIVAPMMLGVAYLTYFERKVIGYMQVRIGPNRVGPWGLIQPIADGLKLLMKEIIVPSGANKGIFIIAPMLAIAPALAAWAVVPFTDSLVLANIDASLLYIMAITSMGVYGIILSGWASNSKYAFLGAMRSAAQMVSYEISMGFSLICVLMVS 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICRS (NADH-quinone oxidoreductase subunit H OS=Rickettsia rickettsii (strain Sheila Smith) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30 Identity = 66/169 (39.05%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L+ + ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 2 LELFFEYIFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNADKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICRO (NADH-quinone oxidoreductase subunit H OS=Rickettsia rickettsii (strain Iowa) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30 Identity = 66/169 (39.05%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L+ + ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 2 LELFFEYIFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNADKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICB8 (NADH-quinone oxidoreductase subunit H OS=Rickettsia bellii (strain OSU 85-389) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30 Identity = 65/162 (40.12%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 9 IFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRCGPNVVGPFGLLQPIADAVKLLFKEPIIPTNADKILFVLAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICAE (NADH-quinone oxidoreductase subunit H OS=Rickettsia africae (strain ESF-5) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.149e-30 Identity = 66/169 (39.05%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L+ + ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 2 LELFFEYIFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNSDKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |