CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICPR (NADH-quinone oxidoreductase subunit H OS=Rickettsia prowazekii GN=nuoH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.113e-30 Identity = 65/162 (40.12%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I + L+ + VIPFS +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 9 MFPLTVIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTDADKILFILAPIITFVLSLIGWAVIPFSSGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICCK (NADH-quinone oxidoreductase subunit H OS=Rickettsia canadensis (strain McKiel) GN=nuoH PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.113e-30 Identity = 63/156 (40.38%), Postives = 107/156 (68.59%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 I++ V+AIT+ +++ V ++ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + V+PF+ LVLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 15 IALKVVAITVPLILCVAYLTYVERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNSDRILFILAPMITFILSLIGWAVVPFAKGLVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_THIDA (NADH-quinone oxidoreductase subunit H OS=Thiobacillus denitrificans (strain ATCC 25259) GN=nuoH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 64/157 (40.76%), Postives = 102/157 (64.97%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + W L I V+ + +GV + + ER+I +Q RIGP G+LQ +AD KLL KE ++PS + +LF +GP +A+ L ++ VIPFS LVLAD+N G+ +AI+S+ G++++G+ SN+KY+FLG +R+AAQ +SYEI + ++ + Sbjct: 19 VAWTLVKIMALVVPLMLGVAYLTYAERKIIGWMQVRIGPNRVGFQGLLQPIADAVKLLMKEIIIPSGASRALFILGPILAIAPALAAWAVIPFSDGLVLADINAGLLYVMAITSMGVYGVIIAGWASNSKYAFLGAMRSAAQIVSYEIAMGFALVGV 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICFE (NADH-quinone oxidoreductase subunit H OS=Rickettsia felis GN=nuoH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 65/162 (40.12%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 9 IFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNSDKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICCN (NADH-quinone oxidoreductase subunit H OS=Rickettsia conorii GN=nuoH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 66/169 (39.05%), Postives = 112/169 (66.27%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L+ + ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 2 LELFFEYIFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNSDKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEMSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICBR (NADH-quinone oxidoreductase subunit H OS=Rickettsia bellii (strain RML369-C) GN=nuoH PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30 Identity = 65/162 (40.12%), Postives = 109/162 (67.28%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 9 IFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNADKILFVLAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BREBN (NADH-quinone oxidoreductase subunit H OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=nuoH PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 7.015e-30 Identity = 66/159 (41.51%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIG-VLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 LW + ++ +LA+ +G V ++ ER++ +Q RIGP PLG+LQ +AD KLL KE++ P + +LF++ P +A V+PF+ ++ ADL IG+ +IA+S I +G++ +G+ SNNKYS +GGLR+AAQ ISYE+PL + V+ I L Sbjct: 16 LWFIIA-AVLLLAVVLGFVTYAIYFERKVIGWMQLRIGPNRVGPLGLLQTVADVAKLLLKEDIRPQHADKALFTLAPILAYAPAFAVLAVMPFTDSIRFADLGIGLLYYIALSGITVLGVITAGWASNNKYSLIGGLRSAAQMISYEVPLVMSVVGIVL 173
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICAH (NADH-quinone oxidoreductase subunit H OS=Rickettsia akari (strain Hartford) GN=nuoH PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30 Identity = 65/162 (40.12%), Postives = 107/162 (66.05%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ L I++ V+AITI +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P + LF + P I I L+ + VIPFS +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + ++++ L Sbjct: 9 IFPLIIIALKVVAITIPLILCVAYLTYAERRVIGLMQLRCGPNVVGPFGLLQPIADAVKLLFKEPIIPINADKILFILAPMITFILSLIGWAVIPFSKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGFVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RICPU (NADH-quinone oxidoreductase subunit H OS=Rickettsia peacockii (strain Rustic) GN=nuoH PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29 Identity = 65/169 (38.46%), Postives = 111/169 (65.68%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L+ + ++ L I++ V+AIT +++ V + ER + +Q R GP P G+LQ +AD KLLFKE ++P+ + LF + P I I L+ + VIPF+ +VLAD+N+G+ +AISS++ G++++G+ SN+KY+FLG +R++AQ ISYE+ + L ++++ L Sbjct: 2 LELFFEYIFPLIIIALKVVAITTPLILCVAYLTYAERRVIGLMQLRRGPNVVGPFGLLQPIADAVKLLFKEPIIPTNSDKILFILAPMITFILSLIGWAVIPFAKGVVLADINVGVLYILAISSLSVYGIIIAGWASNSKYAFLGAIRSSAQMISYEVSMGLVIITVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_PODAN (NADH-ubiquinone oxidoreductase chain 1 OS=Podospora anserina GN=ND1 PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.197e-29 Identity = 63/159 (39.62%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 141 YGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 Y I+ L + + ++ +G+ + ER+ A +Q+R+GP + G+LQA AD KLL KE + P++ N LF +GP I +I LL Y VIP+ +L + D ++GI+ +A+SS+A G+L++G+ +N+KY+FLG LR+ AQ ISYE+ L+ +L + Sbjct: 3 YSIIISLIEVVLVLVPALLGIAYVTIAERKTMASMQRRLGPNFVGYYGLLQAFADALKLLLKEYVAPTQANIILFFLGPVITLIFSLLGYAVIPYGPSLAINDFSLGIYYILAVSSLATYGILLAGWSANSKYAFLGSLRSTAQLISYELVLSSAILLV 161 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |